Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   HZR13_RS08755 Genome accession   NZ_CP058613
Coordinates   1785029..1786018 (-) Length   329 a.a.
NCBI ID   WP_048665322.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 128254     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1780029..1791018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZR13_RS08740 (HZR13_08740) acsA 1781230..1782936 (-) 1707 WP_000862083.1 acetate--CoA ligase -
  HZR13_RS08745 (HZR13_08745) - 1783105..1783737 (+) 633 WP_001015996.1 hypothetical protein -
  HZR13_RS08750 (HZR13_08750) - 1783762..1784931 (+) 1170 WP_001184005.1 acetoin utilization protein AcuC -
  HZR13_RS08755 (HZR13_08755) ccpA 1785029..1786018 (-) 990 WP_048665322.1 catabolite control protein A Regulator
  HZR13_RS08760 (HZR13_08760) - 1786091..1786204 (-) 114 WP_001788994.1 hypothetical protein -
  HZR13_RS08765 (HZR13_08765) - 1786558..1787649 (-) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  HZR13_RS08770 (HZR13_08770) - 1788110..1788214 (-) 105 WP_001791758.1 hypothetical protein -
  HZR13_RS08775 (HZR13_08775) - 1788349..1789866 (-) 1518 WP_000193919.1 hypothetical protein -
  HZR13_RS08780 (HZR13_08780) - 1789940..1790431 (-) 492 WP_000383814.1 DUF948 domain-containing protein -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36076.24 Da        Isoelectric Point: 5.5054

>NTDB_id=405872 HZR13_RS08755 WP_048665322.1 1785029..1786018(-) (ccpA) [Staphylococcus aureus strain 128254]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKSFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=405872 HZR13_RS08755 WP_048665322.1 1785029..1786018(-) (ccpA) [Staphylococcus aureus strain 128254]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAATCTTTTGCCAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

46.951

99.696

0.468
  ccpA Streptococcus pneumoniae D39

46.201

100

0.462

Multiple sequence alignment