Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   GNK04_RS14290 Genome accession   NZ_CP046564
Coordinates   2745592..2746392 (-) Length   266 a.a.
NCBI ID   WP_159783049.1    Uniprot ID   A0A7Z2K637
Organism   Bacillus sp. N1-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2740592..2751392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GNK04_RS14270 (GNK04_14270) bcd 2740811..2741908 (-) 1098 WP_159783040.1 branched-chain amino acid dehydrogenase -
  GNK04_RS14275 (GNK04_14275) yqiS 2741941..2742837 (-) 897 WP_159783042.1 phosphate butyryltransferase -
  GNK04_RS14280 (GNK04_14280) - 2742955..2745030 (-) 2076 WP_159783044.1 sigma-54-dependent Fis family transcriptional regulator -
  GNK04_RS14285 (GNK04_14285) - 2745207..2745446 (+) 240 WP_240903935.1 DUF2627 domain-containing protein -
  GNK04_RS14290 (GNK04_14290) spo0A 2745592..2746392 (-) 801 WP_159783049.1 sporulation transcription factor Spo0A Regulator
  GNK04_RS14295 (GNK04_14295) spoIVB 2746637..2747932 (-) 1296 WP_240903936.1 SpoIVB peptidase -
  GNK04_RS14300 (GNK04_14300) recN 2748057..2749754 (-) 1698 WP_159783051.1 DNA repair protein RecN Machinery gene
  GNK04_RS14305 (GNK04_14305) argR 2749789..2750238 (-) 450 WP_159783053.1 transcriptional regulator ArgR -
  GNK04_RS14310 (GNK04_14310) - 2750406..2751212 (-) 807 WP_159783055.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30142.46 Da        Isoelectric Point: 5.9139

>NTDB_id=405550 GNK04_RS14290 WP_159783049.1 2745592..2746392(-) (spo0A) [Bacillus sp. N1-1]
MQKIKVCLADDNRELVNLIEEYMSRQEDMEVVGTASNGQECLEVLEDQEPDVLVLDIIMPHLDGLAVLERLREMNYTCSV
IMLTAFGQEDVTKKAVDLGASYFILKPFDMDNLASHVRQVSGKKTTFTTNNGSYKRPQRESRPRNLDASITSIIHEIGVP
AHIKGYMYLREAITMVYNDIELLGSITKVLYPDIAKKFNTTSSRVERAIRHAIEVAWSRGNVESISNLFGYTVSMSKAKP
TNSEFIAMVADKLRIEHNMDNYSHSR

Nucleotide


Download         Length: 801 bp        

>NTDB_id=405550 GNK04_RS14290 WP_159783049.1 2745592..2746392(-) (spo0A) [Bacillus sp. N1-1]
GTGCAAAAAATAAAAGTGTGTCTAGCTGATGATAATCGTGAATTGGTGAATTTAATTGAGGAATATATGTCACGACAAGA
GGATATGGAGGTAGTCGGAACCGCTTCCAATGGCCAGGAATGCTTAGAAGTTCTTGAAGATCAAGAACCTGATGTACTTG
TACTTGATATTATTATGCCGCATTTAGATGGCCTGGCTGTTCTCGAACGTTTAAGAGAAATGAATTATACTTGTAGCGTT
ATTATGCTCACTGCATTCGGTCAGGAAGATGTTACGAAAAAAGCGGTAGATTTAGGAGCATCCTACTTTATTTTAAAGCC
GTTTGACATGGATAATTTAGCAAGTCATGTAAGGCAAGTTAGTGGTAAGAAAACAACATTTACAACAAATAATGGCTCGT
ATAAGCGTCCTCAGCGTGAAAGTCGCCCTAGAAACCTTGATGCGAGCATCACGAGTATTATTCATGAAATCGGAGTACCA
GCACATATTAAAGGTTATATGTACTTAAGAGAAGCGATTACGATGGTTTATAATGATATTGAACTATTAGGTTCGATTAC
GAAAGTCCTATATCCTGATATTGCGAAAAAATTCAATACAACATCATCCCGAGTTGAACGCGCGATTCGTCATGCGATTG
AGGTTGCTTGGAGTAGAGGTAATGTAGAATCTATTTCAAACTTGTTCGGCTATACTGTGAGTATGTCTAAAGCGAAACCA
ACAAATTCAGAGTTCATTGCAATGGTTGCTGATAAGCTTCGGATTGAGCACAACATGGACAATTATTCTCATAGCAGGTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-117)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(150-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z2K637

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

75.093

100

0.759

Multiple sequence alignment