Detailed information NTG0405383

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: GOQ08_RS18640
• Genome accession: NZ_CP046549
• Coordinates: 3873140..3873811 (+)
• Length: 223 a.a.
• NCBI ID: WP_052799711.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 19WIARLN022_full
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	3871675..3874952	3873140..3873811	within	0

Gene organization within MGE regions

Location: 3871675..3874952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOQ08_RS18640 (GOQ08_18480)	crp	3873140..3873811 (+)	672	WP_052799711.1	cAMP-activated global transcriptional regulator CRP	Regulator
GOQ08_RS18645 (GOQ08_18485)	-	3873862..3874952 (+)	1091	WP_085940413.1	IS4-like element ISAba1 family transposase	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25213.08 Da
• Isoelectric Point: 8.4691

>NTDB_id=405383 GOQ08_RS18640 WP_052799711.1 3873140..3873811(+) (crp) [Acinetobacter baumannii strain 19WIARLN022_full]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTRQK

Nucleotide

• Length: 672 bp

>NTDB_id=405383 GOQ08_RS18640 WP_052799711.1 3873140..3873811(+) (crp) [Acinetobacter baumannii strain 19WIARLN022_full]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGTCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGACAAAAATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, crp family (Crp) (176-207)

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	100	97.309	0.973
crp	Vibrio cholerae strain A1552	47.317	91.928	0.435
crp	Haemophilus influenzae Rd KW20	48.705	86.547	0.422