Detailed information NTG0040529

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSUST3_RS00820
• Genome accession: NC_015433
• Coordinates: 128671..129105 (+)
• Length: 144 a.a.
• NCBI ID: WP_009909097.1
• Uniprot ID: -
• Organism: Streptococcus suis ST3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123671..134105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUST3_RS00785 (SSUST3_0133)	-	124413..124778 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSUST3_RS00790 (SSUST3_0134)	-	124813..125763 (-)	951	WP_002936565.1	S66 family peptidase	-
SSUST3_RS00795 (SSUST3_0135)	comYA	125849..126799 (+)	951	WP_013730075.1	competence type IV pilus ATPase ComGA	Machinery gene
SSUST3_RS00800 (SSUST3_0136)	comYB	126711..127748 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSUST3_RS00805 (SSUST3_0137)	comYC	127750..128031 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
SSUST3_RS00810 (SSUST3_0138)	comGD	128012..128419 (+)	408	WP_009909093.1	competence type IV pilus minor pilin ComGD	-
SSUST3_RS00815 (SSUST3_0139)	comYE	128391..128684 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSUST3_RS00820 (SSUST3_0140)	comGF/cglF	128671..129105 (+)	435	WP_009909097.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSUST3_RS00825 (SSUST3_0141)	comGG	129083..129493 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
SSUST3_RS00830 (SSUST3_0142)	comYH	129550..130503 (+)	954	WP_013730077.1	class I SAM-dependent methyltransferase	Machinery gene
SSUST3_RS00835 (SSUST3_0143)	-	130553..131740 (+)	1188	WP_013730078.1	acetate kinase	-
SSUST3_RS00840 (SSUST3_0144)	-	132055..132651 (+)	597	WP_009909104.1	folate family ECF transporter S component	-
SSUST3_RS00845 (SSUST3_0145)	-	132662..133918 (+)	1257	WP_013730079.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16449.77 Da
• Isoelectric Point: 5.9234

>NTDB_id=40529 SSUST3_RS00820 WP_009909097.1 128671..129105(+) (comGF/cglF) [Streptococcus suis ST3]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=40529 SSUST3_RS00820 WP_009909097.1 128671..129105(+) (comGF/cglF) [Streptococcus suis ST3]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458