Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HXP40_RS04255 | Genome accession | NZ_CP058342 |
| Coordinates | 878987..879967 (+) | Length | 326 a.a. |
| NCBI ID | WP_001326494.1 | Uniprot ID | P52052 |
| Organism | Escherichia coli strain W60 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 873987..884967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXP40_RS04225 (HXP40_04235) | yggM | 874502..875509 (+) | 1008 | WP_000745210.1 | DUF1202 family protein | - |
| HXP40_RS04230 (HXP40_04240) | hemW | 875664..876800 (-) | 1137 | WP_000239943.1 | radical SAM family heme chaperone HemW | - |
| HXP40_RS04235 (HXP40_04245) | rdgB | 876793..877386 (-) | 594 | WP_001174778.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| HXP40_RS04240 (HXP40_04250) | yggU | 877394..877684 (-) | 291 | WP_000994920.1 | DUF167 family protein YggU | - |
| HXP40_RS04245 (HXP40_04255) | yggT | 877681..878247 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| HXP40_RS04250 (HXP40_04260) | yggS | 878265..878969 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| HXP40_RS04255 (HXP40_04265) | pilT | 878987..879967 (+) | 981 | WP_001326494.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HXP40_RS04260 (HXP40_04270) | ruvX | 880151..880567 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| HXP40_RS04265 (HXP40_04275) | yqgE | 880567..881130 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| HXP40_RS04270 (HXP40_04280) | gshB | 881239..882189 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| HXP40_RS04275 (HXP40_04285) | rsmE | 882202..882933 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| HXP40_RS04280 (HXP40_04290) | endA | 883013..883720 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| HXP40_RS04285 (HXP40_04295) | yggI | 883815..884312 (-) | 498 | WP_001333456.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35994.16 Da Isoelectric Point: 6.0804
>NTDB_id=405247 HXP40_RS04255 WP_001326494.1 878987..879967(+) (pilT) [Escherichia coli strain W60]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=405247 HXP40_RS04255 WP_001326494.1 878987..879967(+) (pilT) [Escherichia coli strain W60]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
Similar proteins
Only experimentally validated proteins are listed.