Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GOM46_RS07675 Genome accession   NZ_CP046525
Coordinates   1567280..1568536 (-) Length   418 a.a.
NCBI ID   WP_235083508.1    Uniprot ID   -
Organism   Streptococcus infantis strain SO     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1562280..1573536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM46_RS07655 (GOM46_07600) - 1562648..1563187 (+) 540 WP_235083504.1 5-formyltetrahydrofolate cyclo-ligase -
  GOM46_RS07660 (GOM46_07605) - 1563171..1563845 (+) 675 WP_235083505.1 rhomboid family intramembrane serine protease -
  GOM46_RS07665 (GOM46_07610) - 1563922..1565301 (-) 1380 WP_235083506.1 glycoside hydrolase family 1 protein -
  GOM46_RS07670 (GOM46_07615) - 1565410..1567263 (-) 1854 WP_235083507.1 proline--tRNA ligase -
  GOM46_RS07675 (GOM46_07620) eeP 1567280..1568536 (-) 1257 WP_235083508.1 RIP metalloprotease RseP Regulator
  GOM46_RS07680 (GOM46_07625) - 1568558..1569361 (-) 804 WP_006151336.1 phosphatidate cytidylyltransferase -
  GOM46_RS07685 (GOM46_07630) - 1569369..1570121 (-) 753 WP_016466323.1 isoprenyl transferase -
  GOM46_RS07690 (GOM46_07635) - 1570335..1570730 (+) 396 WP_006151340.1 helix-hairpin-helix domain-containing protein -
  GOM46_RS07695 (GOM46_07640) - 1571023..1571601 (+) 579 WP_235083509.1 flavin reductase family protein -
  GOM46_RS07700 (GOM46_07645) - 1571588..1572157 (+) 570 WP_235083510.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45842.36 Da        Isoelectric Point: 5.2792

>NTDB_id=405087 GOM46_RS07675 WP_235083508.1 1567280..1568536(-) (eeP) [Streptococcus infantis strain SO]
MIGLLTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRLLPLGGYVRMAGWGEDTTEIKT
GTPVSLTLAEDGKVKRINISGKKVDQTALPMQVTQYDFEDKLFITGLVLEEEKTFSVDHDATIVESDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGVIVFWILIFMQGGVRDTQSNNFSIIPDSAIAKVGVENTAQITKVGSHEISNWQDLIQ
AVEAETKDKTAPVLDVTVSENGTEKQVSVTPEESQGRYILGVQPKLKSDIWSMFVGGFTSAADSALRILNALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGLENVLFFLAMISINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKQEIETYVTLVGVVI
MVVLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=405087 GOM46_RS07675 WP_235083508.1 1567280..1568536(-) (eeP) [Streptococcus infantis strain SO]
ATGATAGGATTATTAACCTTTATCCTTGTTTTTGGAATTATAGTGGTGGTTCACGAGTTCGGACATTTTTACTTTGCCAA
GAAGTCTGGCATTCTGGTTCGTGAATTTGCCATTGGAATGGGTCCAAAAATCTTTGCCCATATCGGGAAAGACGGGACAG
CTTACACGATTCGTCTCCTACCGCTGGGTGGTTATGTCCGCATGGCAGGTTGGGGCGAGGATACCACAGAGATTAAGACA
GGAACTCCTGTTAGTTTGACTTTAGCCGAAGATGGCAAGGTTAAGCGTATCAATATTTCTGGGAAGAAGGTCGACCAAAC
AGCACTTCCGATGCAGGTAACCCAATATGACTTTGAGGATAAACTCTTTATCACTGGTTTGGTTTTGGAAGAGGAAAAAA
CGTTCTCCGTAGACCATGACGCAACTATTGTGGAATCTGATGGAACGGAAGTTCGTATCGCTCCGCTAGACGTCCAATAT
CAAAATGCGACTGTCTGGGGCAAGTTAATTACCAACTTTGCAGGCCCCATGAATAACTTTATCCTAGGAGTTATCGTCTT
CTGGATTTTGATTTTCATGCAAGGTGGTGTTCGTGATACACAAAGTAATAACTTTAGTATCATCCCTGATAGCGCGATTG
CAAAGGTCGGTGTTGAAAATACGGCCCAAATCACTAAAGTCGGTTCACACGAAATCAGTAACTGGCAAGATTTGATTCAG
GCAGTGGAAGCAGAGACCAAGGATAAAACAGCACCTGTTTTAGATGTGACAGTCTCTGAAAATGGAACTGAAAAACAAGT
CAGTGTGACACCTGAGGAAAGTCAAGGGCGTTATATTTTAGGTGTTCAACCGAAACTCAAATCGGATATCTGGTCTATGT
TTGTAGGTGGATTCACATCTGCAGCGGACTCAGCCTTGCGCATTCTTAATGCTTTGAAAAACTTGATTTTCCAACCGGAT
TTGAATAAATTGGGTGGTCCTGTGGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAGAATGGTCTGGAAAACGTCCTGTT
CTTCTTGGCTATGATTTCTATCAATATCGGGATTTTCAACTTGATTCCTATCCCGGCACTTGATGGTGGGAAAATCGTGC
TCAACATCATTGAAGCTATTCGCCGCAAACCACTGAAACAAGAAATTGAAACCTATGTTACTCTAGTTGGAGTTGTGATT
ATGGTTGTCTTGATGATCGCCGTAACCTGGAACGACATCATGCGAACCTTCTTTTAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.762

100

0.651

  eeP Streptococcus thermophilus LMG 18311

64.524

100

0.648


Multiple sequence alignment