Detailed information
Bioinformatically predicted
Overview
| Name | ciaH | Type | Regulator |
| Locus tag | GOM46_RS05400 | Genome accession | NZ_CP046525 |
| Coordinates | 1074205..1075539 (-) | Length | 444 a.a. |
| NCBI ID | WP_006151280.1 | Uniprot ID | F5W294 |
| Organism | Streptococcus infantis strain SO | ||
| Function | repress competence development; post-transcriptional repression of CSP production (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1069205..1080539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM46_RS05375 (GOM46_05365) | rpiA | 1069956..1070639 (-) | 684 | WP_006151272.1 | ribose-5-phosphate isomerase RpiA | - |
| GOM46_RS05380 (GOM46_05370) | - | 1070743..1071672 (-) | 930 | WP_006151241.1 | peptidase U32 family protein | - |
| GOM46_RS05385 (GOM46_05375) | - | 1071782..1072462 (-) | 681 | WP_006151245.1 | ABC transporter ATP-binding protein | - |
| GOM46_RS05390 (GOM46_05380) | - | 1072476..1073531 (-) | 1056 | WP_006151269.1 | ABC transporter permease | - |
| GOM46_RS05395 (GOM46_05385) | - | 1073903..1074178 (+) | 276 | WP_006151224.1 | DUF3270 family protein | - |
| GOM46_RS05400 (GOM46_05390) | ciaH | 1074205..1075539 (-) | 1335 | WP_006151280.1 | sensor histidine kinase | Regulator |
| GOM46_RS05405 (GOM46_05395) | ciaR | 1075532..1076203 (-) | 672 | WP_006151225.1 | response regulator transcription factor | Regulator |
| GOM46_RS05410 (GOM46_05400) | - | 1076317..1078863 (-) | 2547 | WP_235083314.1 | M1 family metallopeptidase | - |
Sequence
Protein
Download Length: 444 a.a. Molecular weight: 50436.82 Da Isoelectric Point: 9.3773
>NTDB_id=405075 GOM46_RS05400 WP_006151280.1 1074205..1075539(-) (ciaH) [Streptococcus infantis strain SO]
MFNKLKKNWYAEDFSYFIRNFGVFTLIFSAMTLIILQVMHSSLYTSVDEKLLALSNNPQDIIQLAVNRATDDVKDINGGN
VTTNSDKRVTISSNTAVILLDSNLNQLVTGNRFLGLDRITFNKKDLNHIRQLHIVNSYGQDEVYRVVLTEMNIDSVSTNI
KYAAILINTSQLEQISQNHEQLIVVVMASFWILSILASLYLARVSVKPLLESMQKQQSFVENASHELRTPLAVLQNRLET
LFRKPEATIMESSESIASSLEEVRNMKFLTTNLLNLARRDDGIKPELGEVEPDFFNTTFTNYEMIASENNRAFRFENRVH
RTIITDKLLLKQLMTILFDNAVKYTEEEGDIYFEISTTERSLYLTVADNGIGISAADKKKIFDRFYRVNKARTRQKGGFG
LGLSLAKQIVDALKGSISVKDNKPNGTVFEVKIAISTPSKRKNK
MFNKLKKNWYAEDFSYFIRNFGVFTLIFSAMTLIILQVMHSSLYTSVDEKLLALSNNPQDIIQLAVNRATDDVKDINGGN
VTTNSDKRVTISSNTAVILLDSNLNQLVTGNRFLGLDRITFNKKDLNHIRQLHIVNSYGQDEVYRVVLTEMNIDSVSTNI
KYAAILINTSQLEQISQNHEQLIVVVMASFWILSILASLYLARVSVKPLLESMQKQQSFVENASHELRTPLAVLQNRLET
LFRKPEATIMESSESIASSLEEVRNMKFLTTNLLNLARRDDGIKPELGEVEPDFFNTTFTNYEMIASENNRAFRFENRVH
RTIITDKLLLKQLMTILFDNAVKYTEEEGDIYFEISTTERSLYLTVADNGIGISAADKKKIFDRFYRVNKARTRQKGGFG
LGLSLAKQIVDALKGSISVKDNKPNGTVFEVKIAISTPSKRKNK
Nucleotide
Download Length: 1335 bp
>NTDB_id=405075 GOM46_RS05400 WP_006151280.1 1074205..1075539(-) (ciaH) [Streptococcus infantis strain SO]
ATGTTTAATAAGTTAAAAAAGAATTGGTACGCAGAAGATTTCAGCTACTTTATCCGTAATTTTGGAGTTTTTACGCTGAT
TTTCTCTGCCATGACCTTGATTATCCTGCAGGTTATGCACTCCAGTCTTTACACGTCTGTAGATGAGAAACTTCTAGCAC
TGAGCAATAATCCTCAGGATATTATTCAATTGGCAGTCAATCGTGCAACAGATGATGTAAAGGATATAAACGGTGGAAAT
GTCACCACAAATTCGGATAAAAGAGTTACAATCAGCTCCAATACAGCAGTTATTTTGCTGGATTCTAACCTCAATCAGTT
AGTAACTGGCAATCGCTTCTTAGGTTTGGATAGAATAACCTTCAATAAAAAGGATTTAAACCATATTCGCCAACTTCATA
TTGTGAATAGCTATGGTCAGGATGAGGTTTACCGTGTTGTCCTGACGGAAATGAATATTGATTCGGTTTCGACTAATATC
AAGTATGCTGCAATCTTGATAAACACTAGCCAACTAGAGCAGATTAGTCAAAATCACGAGCAGTTAATTGTGGTGGTCAT
GGCAAGCTTCTGGATTCTATCTATCTTAGCCAGTCTCTATCTTGCTCGTGTCAGTGTTAAACCCTTACTTGAAAGTATGC
AAAAACAGCAGAGTTTTGTGGAGAATGCCAGTCATGAACTACGGACTCCTTTAGCTGTTCTCCAAAATCGTTTGGAAACA
CTTTTTAGAAAACCAGAAGCGACTATTATGGAGTCCAGTGAGAGCATTGCTTCGAGTTTGGAAGAAGTCCGAAATATGAA
GTTTTTGACGACTAACCTTCTCAATCTCGCACGTAGAGATGATGGGATTAAGCCAGAGCTTGGTGAAGTAGAACCTGATT
TCTTTAATACGACCTTTACCAACTATGAAATGATTGCATCCGAGAATAATCGTGCCTTTCGTTTTGAAAACCGTGTTCAT
CGCACTATCATCACTGATAAACTCCTTCTTAAACAACTGATGACCATTCTGTTTGACAATGCTGTCAAGTATACGGAAGA
AGAAGGAGATATTTATTTTGAAATTTCAACGACAGAACGCAGTCTATATTTAACGGTAGCGGATAATGGAATTGGTATTT
CTGCAGCAGATAAAAAGAAAATCTTTGATCGTTTTTATCGCGTTAATAAGGCACGTACGCGTCAAAAGGGTGGTTTCGGT
TTAGGTTTGTCTTTAGCCAAGCAGATCGTCGATGCCCTTAAGGGAAGCATCAGTGTGAAAGATAACAAACCTAATGGAAC
AGTTTTTGAAGTCAAAATAGCTATCTCAACACCATCAAAACGAAAGAATAAATAA
ATGTTTAATAAGTTAAAAAAGAATTGGTACGCAGAAGATTTCAGCTACTTTATCCGTAATTTTGGAGTTTTTACGCTGAT
TTTCTCTGCCATGACCTTGATTATCCTGCAGGTTATGCACTCCAGTCTTTACACGTCTGTAGATGAGAAACTTCTAGCAC
TGAGCAATAATCCTCAGGATATTATTCAATTGGCAGTCAATCGTGCAACAGATGATGTAAAGGATATAAACGGTGGAAAT
GTCACCACAAATTCGGATAAAAGAGTTACAATCAGCTCCAATACAGCAGTTATTTTGCTGGATTCTAACCTCAATCAGTT
AGTAACTGGCAATCGCTTCTTAGGTTTGGATAGAATAACCTTCAATAAAAAGGATTTAAACCATATTCGCCAACTTCATA
TTGTGAATAGCTATGGTCAGGATGAGGTTTACCGTGTTGTCCTGACGGAAATGAATATTGATTCGGTTTCGACTAATATC
AAGTATGCTGCAATCTTGATAAACACTAGCCAACTAGAGCAGATTAGTCAAAATCACGAGCAGTTAATTGTGGTGGTCAT
GGCAAGCTTCTGGATTCTATCTATCTTAGCCAGTCTCTATCTTGCTCGTGTCAGTGTTAAACCCTTACTTGAAAGTATGC
AAAAACAGCAGAGTTTTGTGGAGAATGCCAGTCATGAACTACGGACTCCTTTAGCTGTTCTCCAAAATCGTTTGGAAACA
CTTTTTAGAAAACCAGAAGCGACTATTATGGAGTCCAGTGAGAGCATTGCTTCGAGTTTGGAAGAAGTCCGAAATATGAA
GTTTTTGACGACTAACCTTCTCAATCTCGCACGTAGAGATGATGGGATTAAGCCAGAGCTTGGTGAAGTAGAACCTGATT
TCTTTAATACGACCTTTACCAACTATGAAATGATTGCATCCGAGAATAATCGTGCCTTTCGTTTTGAAAACCGTGTTCAT
CGCACTATCATCACTGATAAACTCCTTCTTAAACAACTGATGACCATTCTGTTTGACAATGCTGTCAAGTATACGGAAGA
AGAAGGAGATATTTATTTTGAAATTTCAACGACAGAACGCAGTCTATATTTAACGGTAGCGGATAATGGAATTGGTATTT
CTGCAGCAGATAAAAAGAAAATCTTTGATCGTTTTTATCGCGTTAATAAGGCACGTACGCGTCAAAAGGGTGGTTTCGGT
TTAGGTTTGTCTTTAGCCAAGCAGATCGTCGATGCCCTTAAGGGAAGCATCAGTGTGAAAGATAACAAACCTAATGGAAC
AGTTTTTGAAGTCAAAATAGCTATCTCAACACCATCAAAACGAAAGAATAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ciaH | Streptococcus pneumoniae Rx1 |
79.233 |
99.775 |
0.791 |
| ciaH | Streptococcus pneumoniae D39 |
79.233 |
99.775 |
0.791 |
| ciaH | Streptococcus pneumoniae R6 |
79.233 |
99.775 |
0.791 |
| ciaH | Streptococcus pneumoniae TIGR4 |
79.233 |
99.775 |
0.791 |
| ciaH | Streptococcus mutans UA159 |
55.889 |
97.523 |
0.545 |