Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   GE024_RS02725 Genome accession   NZ_CP046521
Coordinates   510949..511956 (+) Length   335 a.a.
NCBI ID   WP_003047152.1    Uniprot ID   A0AAV3FQM1
Organism   Streptococcus canis strain HL_100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 505949..516956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS02695 (GE024_02705) smpB 506180..506647 (+) 468 WP_093998398.1 SsrA-binding protein SmpB -
  GE024_RS02700 (GE024_02710) - 506807..507247 (+) 441 WP_232038566.1 cell division protein FtsW -
  GE024_RS02705 (GE024_02715) - 507379..508305 (-) 927 WP_093998397.1 glycosyltransferase family 2 protein -
  GE024_RS02710 (GE024_02720) - 508589..508966 (-) 378 WP_003047144.1 VOC family protein -
  GE024_RS02715 (GE024_02725) - 508976..509641 (-) 666 WP_093998396.1 NAD(P)H-dependent oxidoreductase -
  GE024_RS02720 (GE024_02730) - 509690..510775 (-) 1086 WP_003047149.1 Xaa-Pro peptidase family protein -
  GE024_RS02725 (GE024_02735) ccpA 510949..511956 (+) 1008 WP_003047152.1 catabolite control protein A Regulator
  GE024_RS02730 (GE024_02740) - 512110..513573 (+) 1464 WP_093998395.1 alpha-amylase -
  GE024_RS02735 (GE024_02745) - 513651..514649 (+) 999 WP_093998394.1 glycosyltransferase -
  GE024_RS02740 (GE024_02750) - 514651..515985 (+) 1335 WP_093998393.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 335 a.a.        Molecular weight: 36890.99 Da        Isoelectric Point: 5.4980

>NTDB_id=404849 GE024_RS02725 WP_003047152.1 510949..511956(+) (ccpA) [Streptococcus canis strain HL_100]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHMSIAFVSGPLIDDINGKVRLAGYKEGLKQNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTRQG

Nucleotide


Download         Length: 1008 bp        

>NTDB_id=404849 GE024_RS02725 WP_003047152.1 510949..511956(+) (ccpA) [Streptococcus canis strain HL_100]
ATGAATACAGATGATACCATCACGATTTACGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACACGTAAGAAAGTTTTAGAAGTCATTGACCGCTTAGATTATCGTCCAAATG
CTGTCGCGCGTGGACTTGCCAGCAAAAAAACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAACAGTTACTTTTCT
ATCTTAGCCAAAGGTATTGATGATATTGCCGCTATGTATAAATATAATATTGTGCTTGCCTCCAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTTAACACTCTCTTTGCTAAGCAGGTGGACGGTATTATTTTTATGGGGCATCACTTGACTGAAA
AGATTCGTGCGGAATTCTCACGTTCACGGACACCGATTGTTTTGGCAGGAACCGTAGACCTCGATCATCAACTACCAAGT
GTTAATATTGACTATAAAGCAGCTGTCTCAAATGTGGTTGATATTTTAGCGGAAAACCATATGAGCATTGCTTTTGTATC
TGGTCCTCTCATTGATGACATCAATGGCAAGGTACGCTTAGCGGGCTACAAAGAAGGTTTGAAGCAAAACAAACTAGATT
TCAAAGAAGGGCTTGTTTTTGAAGCAAATTACTCTTATAAGGAAGGCTTTGAACTAGCACAACGCGTGATTAATTCAGGG
GCAACAGCAGCTTATGTTGCTGAGGATGAATTGGCAGCAGGCCTTTTAAATGGCTTGTTTGAAGCAGGTAAACGCGTGCC
AGAAGACTTTGAAATCATCACAAGCAACGATTCGCCAGTGGTTCAATACACTCGTCCAAACTTGAGTTCTATCAGTCAAC
CCGTTTACGATTTGGGAGCTGTCAGCATGCGCATGTTGACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATT
CTCTTGAACCACGGCATCAAAAAACGTGGTACAACCAGACAAGGTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.844

99.701

0.776

  ccpA Streptococcus pneumoniae D39

76.048

99.701

0.758

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

98.806

0.546


Multiple sequence alignment