Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GE024_RS00875 | Genome accession | NZ_CP046521 |
| Coordinates | 142830..143783 (+) | Length | 317 a.a. |
| NCBI ID | WP_003046195.1 | Uniprot ID | A0AAE4Q9T5 |
| Organism | Streptococcus canis strain HL_100 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 137830..148783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE024_RS00835 (GE024_00825) | - | 138656..139021 (+) | 366 | WP_003046179.1 | DUF1033 family protein | - |
| GE024_RS00840 (GE024_00830) | comYA | 139108..140049 (+) | 942 | WP_003046182.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GE024_RS00845 (GE024_00835) | comYB | 139982..141016 (+) | 1035 | WP_223824829.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GE024_RS00850 (GE024_00840) | comGC/cglC | 141019..141345 (+) | 327 | WP_003046186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GE024_RS00855 (GE024_00845) | comGD | 141320..141748 (+) | 429 | WP_039994748.1 | competence type IV pilus minor pilin ComGD | - |
| GE024_RS00860 (GE024_00850) | comGE | 141726..142001 (+) | 276 | WP_003046190.1 | competence type IV pilus minor pilin ComGE | - |
| GE024_RS00865 (GE024_00855) | comGF | 141982..142422 (+) | 441 | WP_003046192.1 | competence type IV pilus minor pilin ComGF | - |
| GE024_RS00870 (GE024_00860) | comGG | 142400..142780 (+) | 381 | WP_003046193.1 | competence type IV pilus minor pilin ComGG | - |
| GE024_RS00875 (GE024_00865) | comYH | 142830..143783 (+) | 954 | WP_003046195.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GE024_RS00880 (GE024_00870) | - | 143842..145038 (+) | 1197 | WP_093998734.1 | acetate kinase | - |
| GE024_RS00885 (GE024_00875) | - | 145330..145536 (+) | 207 | WP_003046200.1 | helix-turn-helix transcriptional regulator | - |
| GE024_RS11045 (GE024_00885) | - | 145694..146131 (+) | 438 | WP_164403311.1 | hypothetical protein | - |
| GE024_RS00895 (GE024_00890) | proC | 146271..147047 (-) | 777 | WP_093998733.1 | pyrroline-5-carboxylate reductase | - |
| GE024_RS00900 (GE024_00895) | pepA | 147095..148162 (-) | 1068 | WP_093998732.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35915.02 Da Isoelectric Point: 4.7866
>NTDB_id=404834 GE024_RS00875 WP_003046195.1 142830..143783(+) (comYH) [Streptococcus canis strain HL_100]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=404834 GE024_RS00875 WP_003046195.1 142830..143783(+) (comYH) [Streptococcus canis strain HL_100]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
CAAAGATAGCTTGGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTTAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
CAAAGATAGCTTGGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCAGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTGCCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTTAAAAAGTGGAAACTGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.772 |
99.685 |
0.666 |
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |