Detailed information NTG0404664

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: VY92_RS00215
• Genome accession: NZ_CP058307
• Coordinates: 44109..45527 (+)
• Length: 472 a.a.
• NCBI ID: WP_035687996.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain AVPG2015
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 39109..50527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VY92_RS00195 (VY92_000195)	-	40358..41527 (+)	1170	WP_035688001.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
VY92_RS00200 (VY92_000200)	pilF/pilF2	41561..42103 (+)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
VY92_RS00205 (VY92_000205)	dprA	42248..43348 (+)	1101	WP_035687998.1	DNA-processing protein DprA	Machinery gene
VY92_RS00210 (VY92_000210)	rsmD	43345..43953 (-)	609	WP_046097259.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
VY92_RS00215 (VY92_000215)	pilA	44109..45527 (+)	1419	WP_035687996.1	signal recognition particle-docking protein FtsY	Machinery gene
VY92_RS00220 (VY92_000220)	glpQ	46086..47180 (-)	1095	WP_035687993.1	glycerophosphodiester phosphodiesterase	-
VY92_RS00225 (VY92_000225)	glpT	47274..48719 (-)	1446	WP_046097260.1	glycerol-3-phosphate transporter	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 52137.57 Da
• Isoelectric Point: 4.2922

>NTDB_id=404664 VY92_RS00215 WP_035687996.1 44109..45527(+) (pilA) [Avibacterium paragallinarum strain AVPG2015]
MTEKNKKGGFWSWFGLGKKKEEAVEPSLLQENAEEINVSQTEIPSEQSAVENSQGFEQETETLTQAEISSEQSAVENPQG
FEQETESLTQIDITPEQSAVEISQDFEQEEESLTQTDITPEQSAVENPQDFEQETESLTQIEITPEQSEAENPQPAEKEK
PSKGGFFSRLVKGLIRTKQNIGSGFLSLFSGKKIDDDLFEELEEQLLIADIGMPTTTKIINNLTQHASRKQLKEADLLYQ
QLKAELADIIKPVAQPLQIDSSKKPYVILMVGVNGVGKTTTIGKLARQFQMQGKSVMLAAGDTFRAAAVEQLQVWGERNH
IPVIAQNTGADSASVIYDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAI
SQAKLFHEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGIGEKIEDLRPFQAEEFIEALFSKELETQ

Nucleotide

• Length: 1419 bp

>NTDB_id=404664 VY92_RS00215 WP_035687996.1 44109..45527(+) (pilA) [Avibacterium paragallinarum strain AVPG2015]
ATGACAGAAAAAAATAAAAAAGGCGGATTTTGGTCTTGGTTTGGCTTAGGTAAAAAGAAAGAAGAAGCGGTAGAGCCTAG
TTTATTGCAAGAAAATGCGGAAGAAATCAACGTTTCACAAACAGAAATCCCCTCAGAACAAAGTGCGGTGGAAAATTCAC
AAGGTTTTGAGCAAGAAACGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTAGAAAATCCGCAAGGT
TTTGAGCAAGAAACGGAAAGCCTAACGCAAATCGACATCACGCCAGAGCAAAGTGCGGTAGAAATTTCACAAGATTTTGA
GCAGGAAGAGGAAAGCCTAACGCAAACCGACATCACGCCAGAGCAAAGTGCGGTGGAAAATCCGCAAGATTTTGAGCAAG
AAACGGAAAGCCTAACGCAAATCGAAATCACACCAGAGCAAAGTGAAGCAGAAAATCCACAACCCGCAGAGAAAGAAAAA
CCAAGCAAAGGGGGCTTTTTCAGTCGCTTAGTGAAAGGGCTGATTCGCACCAAACAGAATATCGGTTCGGGCTTTTTGAG
CCTATTTTCAGGTAAGAAAATTGATGATGATCTGTTTGAAGAATTAGAAGAACAGTTGCTCATCGCCGATATTGGAATGC
CGACAACAACCAAGATTATCAATAATTTAACTCAACACGCCAGCCGCAAACAGCTAAAAGAGGCAGATTTGTTGTATCAA
CAGCTTAAAGCGGAGCTTGCAGATATTATTAAGCCTGTCGCACAGCCGCTGCAAATTGATAGCAGCAAAAAGCCTTATGT
GATTTTGATGGTGGGCGTAAATGGCGTGGGCAAAACTACCACCATTGGCAAACTTGCACGTCAATTCCAAATGCAAGGCA
AATCGGTGATGTTAGCCGCTGGGGATACTTTCCGTGCCGCCGCCGTAGAACAGCTACAAGTGTGGGGGGAACGCAATCAT
ATTCCTGTTATCGCTCAAAACACGGGGGCGGATTCTGCTTCCGTGATTTATGACGCAATGCAATCAGCCGCGGCGAGAAA
TATTGACATTTTAATCGCCGATACCGCAGGGCGTTTGCAAAATAAAAATAACTTAATGGACGAGCTGAAAAAAATCGTGC
GAGTGATGAAAAAATACGATGAAACCGCACCGCACGAAATTATGCTGACCCTTGACGCGGGTACAGGGCAAAACGCCATC
AGCCAAGCGAAATTATTCCACGAAGCCGTAGGGCTAACGGGGATTAGCTTAACGAAACTTGACGGCACGGCAAAAGGCGG
GGTGATTTTCGCCATCGCAGATCAATTTAAATTGCCGATTCGCTATATTGGTATCGGTGAAAAAATTGAAGACCTCCGCC
CATTCCAAGCGGAAGAATTTATTGAGGCTTTATTTAGTAAAGAATTGGAAACTCAATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (182-246)

• SRP54-type protein, GTPase domain (SRP54) (266-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.914	88.771	0.39