Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | SSGZ1_RS00330 | Genome accession | NC_017617 |
| Coordinates | 63302..63892 (+) | Length | 196 a.a. |
| NCBI ID | WP_011921679.1 | Uniprot ID | A0A0H3N1H3 |
| Organism | Streptococcus suis GZ1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 58302..68892
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSGZ1_RS00320 (SSGZ1_0053) | - | 59685..61208 (+) | 1524 | WP_011921677.1 | Heme/copper-type cytochrome/quinol oxidase subunit 1 | - |
| SSGZ1_RS00325 (SSGZ1_0055) | hexB | 61326..63263 (+) | 1938 | WP_012774891.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| SSGZ1_RS00330 (SSGZ1_0056) | ruvA | 63302..63892 (+) | 591 | WP_011921679.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| SSGZ1_RS00340 (SSGZ1_0057) | - | 64617..65186 (+) | 570 | WP_012774893.1 | DNA-3-methyladenine glycosylase I | - |
| SSGZ1_RS00345 (SSGZ1_0058) | cinA | 65223..66404 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| SSGZ1_RS00350 (SSGZ1_0059) | recA | 66456..67607 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| SSGZ1_RS00355 (SSGZ1_0060) | spx | 67843..68241 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| SSGZ1_RS00360 (SSGZ1_0061) | - | 68341..68607 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21739.10 Da Isoelectric Point: 5.0800
>NTDB_id=40455 SSGZ1_RS00330 WP_011921679.1 63302..63892(+) (ruvA) [Streptococcus suis GZ1]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=40455 SSGZ1_RS00330 WP_011921679.1 63302..63892(+) (ruvA) [Streptococcus suis GZ1]
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae D39 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae TIGR4 |
76.142 |
100 |
0.765 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
39.409 |
100 |
0.408 |