Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GFX43_RS15445 Genome accession   NZ_CP046448
Coordinates   3014581..3014772 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain ZD01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3009581..3019772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFX43_RS15420 (GFX43_015420) appD 3009908..3010894 (-) 987 WP_015383344.1 oligopeptide ABC transporter ATP-binding protein AppD -
  GFX43_RS15425 (GFX43_015425) yjaZ 3011087..3011872 (-) 786 WP_015383343.1 DUF2268 domain-containing protein -
  GFX43_RS15430 (GFX43_015430) fabF 3011948..3013189 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  GFX43_RS15435 (GFX43_015435) fabH 3013212..3014150 (-) 939 WP_015483083.1 beta-ketoacyl-ACP synthase III -
  GFX43_RS15440 (GFX43_015440) yjzB 3014315..3014551 (+) 237 WP_015383342.1 spore coat protein YjzB -
  GFX43_RS15445 (GFX43_015445) comZ 3014581..3014772 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GFX43_RS15450 (GFX43_015450) med 3014787..3015740 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  GFX43_RS15455 (GFX43_015455) - 3015830..3016387 (-) 558 WP_015383340.1 hypothetical protein -
  GFX43_RS15460 (GFX43_015460) - 3016469..3017203 (-) 735 WP_015483082.1 hypothetical protein -
  GFX43_RS15465 (GFX43_015465) yjzD 3017454..3017639 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GFX43_RS15470 (GFX43_015470) yjzC 3017685..3017864 (-) 180 WP_003245356.1 YjzC family protein -
  GFX43_RS15475 (GFX43_015475) argF 3017950..3018909 (-) 960 WP_015383338.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=404419 GFX43_RS15445 WP_003224559.1 3014581..3014772(-) (comZ) [Bacillus subtilis strain ZD01]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=404419 GFX43_RS15445 WP_003224559.1 3014581..3014772(-) (comZ) [Bacillus subtilis strain ZD01]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTGTTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment