Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   GFX43_RS15335 Genome accession   NZ_CP046448
Coordinates   2992647..2993303 (-) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZD01     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2987647..2998303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFX43_RS15310 (GFX43_015310) spxH 2987857..2988756 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  GFX43_RS15315 (GFX43_015315) - 2989071..2989238 (+) 168 WP_003244944.1 hypothetical protein -
  GFX43_RS15320 (GFX43_015320) pepF 2989276..2991105 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  GFX43_RS15325 (GFX43_015325) coiA 2991335..2992486 (-) 1152 WP_015483087.1 competence protein CoiA Machinery gene
  GFX43_RS15330 (GFX43_015330) - 2992530..2992644 (+) 115 Protein_3016 hypothetical protein -
  GFX43_RS15335 (GFX43_015335) mecA 2992647..2993303 (-) 657 WP_015383354.1 adaptor protein MecA Regulator
  GFX43_RS15340 (GFX43_015340) - 2993270..2993410 (-) 141 WP_119122854.1 hypothetical protein -
  GFX43_RS15345 (GFX43_015345) yjbE 2993580..2994236 (+) 657 WP_015483086.1 TerC family protein -
  GFX43_RS15350 (GFX43_015350) spx 2994279..2994674 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  GFX43_RS15355 (GFX43_015355) yjbC 2994855..2995430 (-) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  GFX43_RS15360 (GFX43_015360) yjbB 2995594..2996811 (-) 1218 WP_080030656.1 MFS transporter -
  GFX43_RS15365 (GFX43_015365) oppF 2996917..2997834 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=404416 GFX43_RS15335 WP_015383354.1 2992647..2993303(-) (mecA) [Bacillus subtilis strain ZD01]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=404416 GFX43_RS15335 WP_015383354.1 2992647..2993303(-) (mecA) [Bacillus subtilis strain ZD01]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCTGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995

Multiple sequence alignment