Detailed information NTG0404118

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: HWV68_RS16000
• Genome accession: NZ_CP058242
• Coordinates: 3044171..3045175 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain SP1
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3039171..3050175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWV68_RS15975 (HWV68_15970)	acuA	3040098..3040730 (+)	633	WP_003229296.1	acetoin utilization protein acetyltransferase AcuA	-
HWV68_RS15980 (HWV68_15975)	acuB	3040757..3041401 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
HWV68_RS15985 (HWV68_15980)	acuC	3041398..3042561 (+)	1164	WP_004398517.1	acetoin utilization protein AcuC	-
HWV68_RS15990 (HWV68_15985)	motS	3042572..3043300 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
HWV68_RS15995 (HWV68_15990)	motP	3043290..3044108 (-)	819	WP_004398692.1	flagellar motor protein MotP	-
HWV68_RS16000 (HWV68_15995)	ccpA	3044171..3045175 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
HWV68_RS16005 (HWV68_16000)	aroX	3045451..3046527 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
HWV68_RS16010 (HWV68_16005)	ytxJ	3046763..3047089 (-)	327	WP_003229280.1	bacillithiol system redox-active protein YtxJ	-
HWV68_RS16015 (HWV68_16010)	ytxH	3047113..3047568 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
HWV68_RS16020 (HWV68_16015)	ytxG	3047599..3048021 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
HWV68_RS16025 (HWV68_16020)	murC	3048183..3049481 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=404118 HWV68_RS16000 WP_003229285.1 3044171..3045175(-) (ccpA) [Bacillus subtilis strain SP1]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=404118 HWV68_RS16000 WP_003229285.1 3044171..3045175(-) (ccpA) [Bacillus subtilis strain SP1]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503