Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GL185_RS07525 Genome accession   NZ_CP046357
Coordinates   1502592..1503350 (-) Length   252 a.a.
NCBI ID   WP_000410383.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 525     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497592..1508350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL185_RS07500 (GL185_07635) pth 1497624..1498193 (-) 570 WP_000163930.1 aminoacyl-tRNA hydrolase -
  GL185_RS07505 (GL185_07640) ychF 1498265..1499380 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  GL185_RS07510 (GL185_07645) - 1499464..1499658 (-) 195 WP_000285194.1 DUF951 family protein -
  GL185_RS07515 (GL185_07650) dnaN 1499723..1500859 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  GL185_RS07520 (GL185_07655) dnaA 1501018..1502379 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  GL185_RS07525 (GL185_07660) spo0J 1502592..1503350 (-) 759 WP_000410383.1 ParB/RepB/Spo0J family partition protein Regulator
  GL185_RS07530 (GL185_07665) htrA 1503408..1504589 (-) 1182 WP_000681598.1 S1C family serine protease Regulator
  GL185_RS07535 (GL185_07670) rlmH 1504772..1505251 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GL185_RS07545 (GL185_07680) comC/comC2 1505533..1505658 (+) 126 WP_000799694.1 competence-stimulating peptide ComC Regulator
  GL185_RS07550 (GL185_07685) comD/comD2 1505679..1507004 (+) 1326 WP_024477997.1 competence system sensor histidine kinase ComD Regulator
  GL185_RS07555 (GL185_07690) comE 1507001..1507753 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=403181 GL185_RS07525 WP_000410383.1 1502592..1503350(-) (spo0J) [Streptococcus pneumoniae strain 525]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=403181 GL185_RS07525 WP_000410383.1 1502592..1503350(-) (spo0J) [Streptococcus pneumoniae strain 525]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
GCTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(144-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504

Multiple sequence alignment