Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FOB91_RS10605 Genome accession   NZ_CP046328
Coordinates   2181692..2182696 (+) Length   334 a.a.
NCBI ID   WP_012000235.1    Uniprot ID   Q3Y532
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2176692..2187696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS10580 (FOB91_10580) - 2177018..2178046 (-) 1029 WP_041789612.1 ABC transporter substrate-binding protein -
  FOB91_RS10585 (FOB91_10585) - 2178191..2178946 (-) 756 WP_012000231.1 ABC transporter ATP-binding protein -
  FOB91_RS10590 (FOB91_10590) - 2178948..2179994 (-) 1047 WP_012000232.1 FecCD family ABC transporter permease -
  FOB91_RS10760 (FOB91_10595) - 2180287..2180394 (+) 108 Protein_2044 DNA-entry nuclease -
  FOB91_RS10600 (FOB91_10600) - 2180445..2181527 (-) 1083 WP_012000233.1 M24 family metallopeptidase -
  FOB91_RS10605 (FOB91_10605) ccpA 2181692..2182696 (+) 1005 WP_012000235.1 catabolite control protein A Regulator
  FOB91_RS10610 (FOB91_10610) - 2182841..2183839 (+) 999 WP_041789613.1 glycosyltransferase family 4 protein -
  FOB91_RS10615 (FOB91_10615) - 2183841..2185154 (+) 1314 WP_012000237.1 glycosyltransferase family 4 protein -
  FOB91_RS10620 (FOB91_10620) - 2185190..2185552 (+) 363 WP_012000238.1 hypothetical protein -
  FOB91_RS10765 (FOB91_10630) - 2185886..2186257 (+) 372 WP_012000239.1 hypothetical protein -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37022.13 Da        Isoelectric Point: 6.5109

>NTDB_id=402724 FOB91_RS10605 WP_012000235.1 2181692..2182696(+) (ccpA) [Streptococcus gordonii strain FDAARGOS_683]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPSITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTIDVEHQLPS
VNIDYKQATIDAITFLAKRNKKIAFVCGPLVDDINGKVRLSGYKTALKSKKLSYSEGLVFESKYGYDDGYNLAERVIASK
ATAAFVTGDELAAGLLNGLADCGVKIPEDFEIITSDDSQISRYTRPNLSTISQPLYDLGAISMRMLTKIMHKEELEEREV
VLSHGIYERNSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=402724 FOB91_RS10605 WP_012000235.1 2181692..2182696(+) (ccpA) [Streptococcus gordonii strain FDAARGOS_683]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCCCGTGAAGCAGGGGTTTCTATGGCGACAGTTAGTCGTGTAGT
TAATGGAAACAAGAATGTAAAAGAAAACACTCGGAAAAAAGTTTTGGAAGTAATTGATCGCCTTGATTATCGTCCAAATG
CAGTAGCTCGTGGTTTGGCTAGCAAGAAGACTACGACAGTTGGTGTTGTGATTCCAAGTATTACAAATAGTTATTTCTCA
ACACTCGCCAAGGGAATTGATGATATTGCTGAGATGTATAAATACAATATCGTCCTAGCAAACAGCGATGAGGATGATGA
TAAGGAAGTTTCAGTTGTAAACACTCTCTTTTCGAAACAAGTAGATGGTATTATCTTTATGGGTTACCACCTTACTGAAA
AGATTCGGTCAGAATTTTCACGCTCACGCACGCCAGTTGTCTTGGCTGGAACTATTGATGTGGAGCACCAATTGCCAAGT
GTTAATATAGATTATAAACAGGCTACAATTGATGCTATCACATTCCTTGCTAAGCGCAATAAAAAAATTGCTTTTGTGTG
CGGACCTTTAGTTGATGATATCAATGGAAAAGTACGCTTATCCGGTTATAAAACGGCTCTTAAGAGCAAAAAGCTGTCAT
ACAGCGAAGGTCTTGTTTTTGAGTCTAAGTATGGCTATGATGATGGCTATAATTTAGCTGAACGAGTAATTGCTTCTAAA
GCAACGGCTGCTTTTGTTACAGGTGATGAGCTGGCAGCTGGTCTTTTAAACGGACTAGCTGATTGCGGAGTAAAAATTCC
AGAGGATTTTGAAATTATTACTAGCGATGATTCACAAATATCTCGCTATACACGTCCAAATTTGTCGACTATAAGCCAGC
CTTTATATGATTTAGGTGCTATTAGTATGCGTATGCTGACTAAAATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
GTTCTATCTCATGGTATTTACGAACGGAACTCAACTAGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q3Y532

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

100

100

1

  ccpA Streptococcus pneumoniae D39

86.826

100

0.868

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.102

0.563


Multiple sequence alignment