Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SALIVA_RS02360 Genome accession   NC_017595
Coordinates   469220..470026 (+) Length   268 a.a.
NCBI ID   WP_014634015.1    Uniprot ID   -
Organism   Streptococcus salivarius JIM8777     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 464220..475026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS02335 (SALIVA_0472) tpiA 464411..465169 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  SALIVA_RS02340 (SALIVA_0473) recP/tkt 465435..467420 (+) 1986 WP_014634012.1 transketolase Machinery gene
  SALIVA_RS02350 (SALIVA_0475) tmk 467710..468339 (+) 630 WP_014634013.1 dTMP kinase -
  SALIVA_RS02355 (SALIVA_0476) - 468348..469223 (+) 876 WP_014634014.1 DNA polymerase III subunit delta' -
  SALIVA_RS02360 (SALIVA_0477) yaaT 469220..470026 (+) 807 WP_014634015.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  SALIVA_RS02365 (SALIVA_0478) yabA 470013..470333 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  SALIVA_RS02370 (SALIVA_0479) rsmI 470336..471202 (+) 867 WP_014634016.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SALIVA_RS02375 (SALIVA_0480) - 471340..472575 (+) 1236 WP_014634017.1 ammonium transporter -
  SALIVA_RS02380 (SALIVA_0481) - 472586..472927 (+) 342 WP_014634018.1 P-II family nitrogen regulator -
  SALIVA_RS02385 (SALIVA_0483) - 473018..473674 (+) 657 WP_014634019.1 glycoside hydrolase family 73 protein -
  SALIVA_RS02390 (SALIVA_0484) - 473692..474513 (+) 822 WP_002885966.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29771.18 Da        Isoelectric Point: 4.6550

>NTDB_id=40267 SALIVA_RS02360 WP_014634015.1 469220..470026(+) (yaaT) [Streptococcus salivarius JIM8777]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPELSLPADLNRVEGLAGEKDFARYEENLLK
AEKSMGVVAELIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=40267 SALIVA_RS02360 WP_014634015.1 469220..470026(+) (yaaT) [Streptococcus salivarius JIM8777]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACTGATTTTCCTGAGCTTA
GTTTACCTGCGGATCTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGAGGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGAATTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
ATTAAATAACTCTTATGTGCTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGACGGGCACTCTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGATTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.966

98.134

0.422

Multiple sequence alignment