Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOC36_RS11315 | Genome accession | NZ_CP046307 |
| Coordinates | 2393950..2394468 (+) | Length | 172 a.a. |
| NCBI ID | WP_003129252.1 | Uniprot ID | A0A1V8Z0P0 |
| Organism | Enterococcus gallinarum strain FDAARGOS_728 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2388950..2399468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC36_RS11305 (FOC36_11305) | gyrA | 2390955..2393384 (+) | 2430 | WP_229073633.1 | DNA gyrase subunit A | - |
| FOC36_RS11310 (FOC36_11310) | rpsF | 2393608..2393907 (+) | 300 | WP_003129251.1 | 30S ribosomal protein S6 | - |
| FOC36_RS11315 (FOC36_11315) | ssb | 2393950..2394468 (+) | 519 | WP_003129252.1 | single-stranded DNA-binding protein | Machinery gene |
| FOC36_RS11320 (FOC36_11320) | rpsR | 2394492..2394728 (+) | 237 | WP_003129253.1 | 30S ribosomal protein S18 | - |
| FOC36_RS11325 (FOC36_11325) | - | 2394987..2396438 (+) | 1452 | WP_155853266.1 | DHH family phosphoesterase | - |
| FOC36_RS11330 (FOC36_11330) | rplI | 2396452..2396904 (+) | 453 | WP_003129255.1 | 50S ribosomal protein L9 | - |
| FOC36_RS11335 (FOC36_11335) | dnaB | 2397026..2398396 (+) | 1371 | WP_003129256.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18889.44 Da Isoelectric Point: 4.7200
>NTDB_id=402515 FOC36_RS11315 WP_003129252.1 2393950..2394468(+) (ssb) [Enterococcus gallinarum strain FDAARGOS_728]
MINNVVLVGRLTKDPDLRYTANGTGVASFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRNASEQRRTTESGGNTSYNTSGSSGFGNNSTNQNQSSQPSGMPNFDRDNSDPFGN
SSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTANGTGVASFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRNASEQRRTTESGGNTSYNTSGSSGFGNNSTNQNQSSQPSGMPNFDRDNSDPFGN
SSIDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=402515 FOC36_RS11315 WP_003129252.1 2393950..2394468(+) (ssb) [Enterococcus gallinarum strain FDAARGOS_728]
TTGATTAATAATGTTGTATTAGTAGGAAGATTAACCAAAGATCCTGATTTACGATACACTGCTAACGGCACTGGCGTCGC
GTCTTTTACATTGGCTGTAAATCGTAATTTTACAAACCAAAGTGGAGAACGTGAAGCTGATTTCATCAATTGTGTGATTT
GGAGAAAACCTGCAGAAACACTGGCTAATTATGCTCGTAAGGGTACATTACTTGGTGTGACTGGAAGAATCCAAACACGT
TCTTATGACAATCAACAAGGACAACGTGTATATGTAACTGAAGTTGTAGCAGACAATTTTCAATTGTTAGAATCTCGAAA
TGCTTCTGAACAACGACGCACTACCGAAAGCGGTGGAAATACTTCGTATAATACTAGTGGTTCTTCTGGATTCGGAAACA
ATAGCACAAATCAAAATCAATCCTCTCAACCATCAGGAATGCCTAACTTTGATCGAGATAATTCTGATCCATTCGGAAAC
TCGTCAATTGACATTTCAGACGATGATTTACCATTCTAA
TTGATTAATAATGTTGTATTAGTAGGAAGATTAACCAAAGATCCTGATTTACGATACACTGCTAACGGCACTGGCGTCGC
GTCTTTTACATTGGCTGTAAATCGTAATTTTACAAACCAAAGTGGAGAACGTGAAGCTGATTTCATCAATTGTGTGATTT
GGAGAAAACCTGCAGAAACACTGGCTAATTATGCTCGTAAGGGTACATTACTTGGTGTGACTGGAAGAATCCAAACACGT
TCTTATGACAATCAACAAGGACAACGTGTATATGTAACTGAAGTTGTAGCAGACAATTTTCAATTGTTAGAATCTCGAAA
TGCTTCTGAACAACGACGCACTACCGAAAGCGGTGGAAATACTTCGTATAATACTAGTGGTTCTTCTGGATTCGGAAACA
ATAGCACAAATCAAAATCAATCCTCTCAACCATCAGGAATGCCTAACTTTGATCGAGATAATTCTGATCCATTCGGAAAC
TCGTCAATTGACATTTCAGACGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.046 |
100 |
0.587 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
100 |
0.581 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
61.628 |
0.384 |