Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GMB29_RS22815 Genome accession   NZ_CP046266
Coordinates   4728518..4730818 (-) Length   766 a.a.
NCBI ID   WP_136352623.1    Uniprot ID   A0A4S4C0B9
Organism   Metabacillus sediminilitoris strain DSL-17     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 4723518..4735818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GMB29_RS22775 (GMB29_22775) - 4723923..4724360 (+) 438 WP_227551415.1 Na(+)/H(+) antiporter subunit B -
  GMB29_RS22780 (GMB29_22780) - 4724361..4724699 (+) 339 WP_136352629.1 Na(+)/H(+) antiporter subunit C -
  GMB29_RS22785 (GMB29_22785) - 4724692..4726173 (+) 1482 WP_136352628.1 Na+/H+ antiporter subunit D -
  GMB29_RS22790 (GMB29_22790) - 4726179..4726655 (+) 477 WP_136352627.1 Na+/H+ antiporter subunit E -
  GMB29_RS22795 (GMB29_22795) - 4726655..4726939 (+) 285 WP_136352626.1 Na(+)/H(+) antiporter subunit F1 -
  GMB29_RS22800 (GMB29_22800) mnhG 4726923..4727285 (+) 363 WP_136352625.1 monovalent cation/H(+) antiporter subunit G -
  GMB29_RS22805 (GMB29_22805) - 4727351..4727740 (-) 390 WP_196305204.1 hotdog fold thioesterase -
  GMB29_RS22810 (GMB29_22810) comA 4727769..4728410 (-) 642 WP_136352624.1 response regulator transcription factor Regulator
  GMB29_RS22815 (GMB29_22815) comP 4728518..4730818 (-) 2301 WP_136352623.1 sensor histidine kinase Regulator
  GMB29_RS22820 (GMB29_22820) comX 4730841..4730999 (-) 159 WP_136352622.1 competence pheromone ComX -
  GMB29_RS22825 (GMB29_22825) - 4731002..4731943 (-) 942 WP_136352621.1 polyprenyl synthetase family protein -
  GMB29_RS22830 (GMB29_22830) - 4732321..4732461 (-) 141 WP_136352620.1 DegQ family regulator -
  GMB29_RS22835 (GMB29_22835) - 4732822..4733046 (-) 225 WP_136352619.1 hypothetical protein -
  GMB29_RS22840 (GMB29_22840) - 4733356..4734048 (+) 693 WP_136352618.1 TerC family protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88814.37 Da        Isoelectric Point: 8.4189

>NTDB_id=402105 GMB29_RS22815 WP_136352623.1 4728518..4730818(-) (comP) [Metabacillus sediminilitoris strain DSL-17]
MRITFNRIIQIAVILSIIVTFYTIHLNYKYPYVGAGVKVTSDNEMLINVIEPKTWAEKVGIHLNDVVLEINNEDPLLHSP
AIKYGILEQVYDLKVLQNGTIKEFEIPTSLISYQSLFIIIIPLTVLFLCLFCIFFVYRTNKGVNLRSAHFLNLFLLIIGM
AYISASGSSRGDSISRYINLTLFLLVPVSYLHFIYQYFQELGKKLFSFNFLRIGYLLVIINFVSEIVQNMLIVNNFDFNR
ILNLCSFLFLLVLTFVLKFTGLKKIKYSEQAYIVKILIMTNVIAFTPFLLFYVIPYVIFQKYIFSATFLAAFLLLIPFSL
VYQFLATKIYDIDFLLGRIRYYSLLAVIPSFIIVGIMLLLKENNPTFYPIRLSVYIYLVIVLIFYSKEILDFRFRFKRFS
EKYNYQDSIFKYTQSIRKASNLEHVVSELKQVILDVLLVSKAYFIEVDREKNLTSVDLNAKEADYSPYIKQIRDVTDEIG
KIIEVDRGFVINTGETENKSYVLLCLSILNTPRLTRDEISWLKTLSFYTNVSLENFLKIDELMQHMQKLETEGHNPGWLT
KLLFSIEEKQRSNLAKDLHDSVLQDLVSLKRQCELALVEVDADSSQLKKKLQEMNSSMTKIIKTTRETCQELRPQLLYDL
GLVKALNKLVMQYQEYVDFDIRINTGNFTITLDIDTQLNIYRIVQELLTNAHKHSKASQVLIILVCIKEKIVLHYEDNGV
GFEYRDFYDKTESMGLSGISERVKALKGSITINTSKGNGLKIDVEI

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=402105 GMB29_RS22815 WP_136352623.1 4728518..4730818(-) (comP) [Metabacillus sediminilitoris strain DSL-17]
ATGCGTATTACCTTTAATAGAATAATTCAAATAGCAGTCATACTCAGCATAATTGTAACTTTTTACACCATACACTTGAA
TTATAAGTATCCGTATGTTGGAGCTGGTGTTAAAGTAACAAGTGATAATGAAATGTTGATAAATGTTATTGAACCAAAGA
CGTGGGCTGAAAAAGTTGGCATTCATCTAAACGACGTTGTTTTAGAAATTAATAATGAAGATCCGTTGTTACACAGCCCA
GCTATAAAATATGGAATTCTTGAACAAGTATATGATTTAAAGGTTTTACAAAATGGTACAATAAAAGAATTTGAAATACC
AACATCACTTATTAGTTATCAAAGTTTGTTTATTATAATAATTCCTTTGACTGTCCTTTTTTTATGTTTATTTTGTATTT
TTTTCGTCTATCGAACAAACAAAGGTGTAAATTTAAGGTCTGCTCACTTTTTAAATTTGTTTCTTTTAATTATTGGTATG
GCATATATAAGTGCAAGTGGTTCTTCAAGAGGAGATTCAATAAGTCGATATATTAATTTGACTCTTTTTTTATTAGTTCC
TGTGAGCTACCTTCATTTTATATATCAATATTTTCAAGAATTAGGAAAAAAACTATTTAGTTTCAATTTCCTAAGAATTG
GCTATCTCCTGGTAATTATTAACTTCGTTTCAGAAATAGTTCAAAATATGCTAATAGTAAACAACTTTGATTTTAATAGA
ATATTAAATCTATGTTCATTTTTATTCTTACTTGTTTTAACCTTTGTTTTAAAGTTTACAGGTCTGAAAAAAATAAAATA
TTCTGAGCAAGCTTATATAGTAAAGATTCTTATAATGACAAACGTAATAGCATTTACACCCTTTTTACTATTTTACGTTA
TACCATATGTTATCTTTCAAAAGTATATCTTTTCAGCAACTTTTTTAGCTGCCTTTTTATTATTAATTCCTTTTTCTTTG
GTATATCAATTCTTAGCTACTAAAATATATGATATAGATTTTCTATTAGGAAGAATTAGGTATTACTCATTATTAGCAGT
TATTCCCTCATTTATTATAGTAGGAATTATGCTCTTATTAAAAGAAAATAACCCAACCTTTTATCCAATTAGGCTATCTG
TATATATCTATTTAGTAATAGTTTTAATATTCTATTCCAAAGAAATCTTGGATTTCCGCTTTCGATTTAAAAGATTTTCT
GAAAAATATAACTATCAAGATAGCATTTTTAAATACACACAAAGTATCAGAAAGGCAAGTAATTTAGAGCATGTTGTTTC
TGAGTTAAAACAAGTTATTTTAGATGTTTTACTTGTAAGTAAAGCTTATTTTATTGAAGTGGATCGTGAAAAAAATCTTA
CATCTGTTGATTTAAACGCTAAAGAAGCGGATTATAGCCCATATATTAAACAGATAAGAGATGTAACTGATGAAATTGGG
AAAATCATCGAAGTAGATCGAGGATTTGTCATTAATACTGGTGAAACTGAAAATAAAAGCTATGTTTTGCTTTGCTTATC
TATTCTTAATACACCAAGACTCACAAGAGACGAAATTTCTTGGTTAAAAACCTTATCATTCTACACAAATGTTTCTTTAG
AGAATTTTTTAAAGATTGACGAACTTATGCAGCATATGCAAAAGCTTGAGACAGAAGGACATAATCCAGGCTGGCTGACG
AAGCTGTTGTTTTCGATCGAAGAGAAGCAACGTTCTAATTTAGCGAAGGATCTTCACGATTCTGTGCTGCAAGATTTAGT
GTCTTTAAAGAGACAGTGTGAGCTTGCATTAGTTGAAGTTGATGCGGATTCAAGTCAATTAAAGAAAAAGCTGCAAGAGA
TGAATAGCAGTATGACAAAGATCATTAAAACGACACGTGAGACATGCCAAGAACTTCGTCCACAATTACTTTATGATTTA
GGTTTAGTAAAAGCATTAAATAAGCTTGTTATGCAATATCAGGAATATGTTGATTTTGACATTCGTATCAATACAGGCAA
CTTTACAATAACACTTGATATTGATACACAATTAAACATTTATCGCATTGTTCAAGAGCTTTTAACAAATGCACACAAAC
ATTCAAAAGCATCACAAGTTCTTATTATATTAGTTTGTATTAAAGAAAAAATTGTTCTGCATTATGAAGATAATGGAGTA
GGCTTTGAATATAGAGATTTTTATGATAAGACTGAAAGTATGGGCTTGTCGGGAATTAGTGAGCGTGTAAAAGCATTAAA
AGGCTCAATTACGATAAATACGTCAAAAGGTAATGGATTAAAAATTGATGTTGAGATATAG

Domains


Predicted by InterproScan.

(571-637)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4S4C0B9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.671

99.347

0.493


Multiple sequence alignment