Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SOR_RS04645 Genome accession   NC_015291
Coordinates   920709..921518 (+) Length   269 a.a.
NCBI ID   WP_001290609.1    Uniprot ID   A0A1X1GEV5
Organism   Streptococcus oralis Uo5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 915709..926518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS04625 (SOR_0946) pta 916366..917340 (+) 975 WP_000451575.1 phosphate acetyltransferase -
  SOR_RS04630 (SOR_0947) mutY 917423..918601 (+) 1179 WP_000886156.1 A/G-specific adenine glycosylase -
  SOR_RS04635 (SOR_0948) micA 918658..919365 (+) 708 WP_000722055.1 response regulator YycF Regulator
  SOR_RS04640 (SOR_0949) micB 919358..920707 (+) 1350 WP_000568722.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SOR_RS04645 (SOR_0950) vicX 920709..921518 (+) 810 WP_001290609.1 MBL fold metallo-hydrolase Regulator
  SOR_RS04650 (SOR_0951) - 921553..921900 (-) 348 WP_000434657.1 thiol reductase thioredoxin -
  SOR_RS04655 (SOR_0952) - 922011..923729 (-) 1719 WP_000222129.1 phospho-sugar mutase -
  SOR_RS04660 (SOR_0954) - 924140..925293 (+) 1154 Protein_874 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29921.90 Da        Isoelectric Point: 6.3426

>NTDB_id=40197 SOR_RS04645 WP_001290609.1 920709..921518(+) (vicX) [Streptococcus oralis Uo5]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=40197 SOR_RS04645 WP_001290609.1 920709..921518(+) (vicX) [Streptococcus oralis Uo5]
ATGAGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACTCCAAAAAA
GAAAATCTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATCACCAGTCTTTTGAGCGAAATCAATCGCAAACCAGAAGATC
TGGATGCGATTCTGATTACGCATGAGCACTCAGATCATATTCATGGAGTTGGTGTATTGGCTCGCAAATATGGTATGGAC
CTTTACGCCAATGAAAAAACCTGGCAGGCTATGGAAAATAGCAAGTACCTCGGTAAGGTGGATTCATCGCAGAAGCATAT
TTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATTGATATTGAGAGTTTTGGGGTTAGCCATGATGCGGCAGCACCCC
AGTTTTACCGCTTTATGAAAGACGACAAGAGCTTCGTCATGTTGACCGATACAGGTTATGTTAGTGATCGTATGGCAGGG
ATTGTTGAGAATGCTGACGGTTATCTTATCGAGTCGAACCACGACGTGGAAATCTTACGAGCTGGATCTTATGCTTGGCG
TCTCAAACAGCGAATTCTATCTGATCTCGGTCACCTTTCTAACGAGGACGGTGCTGAAGCCATGATTCGTGCAATGGGAA
ATCGAACAAAGAAAATCTATCTTGGGCATTTGTCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAT
CAGTTAGCCCAGGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCTCCAGATACCGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1GEV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.323

100

0.773

Multiple sequence alignment