Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SOR_RS01150 Genome accession   NC_015291
Coordinates   218590..219600 (+) Length   336 a.a.
NCBI ID   WP_001090635.1    Uniprot ID   I0Q241
Organism   Streptococcus oralis Uo5     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 213590..224600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS01125 (SOR_0227) - 213903..215225 (+) 1323 WP_001002852.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SOR_RS01130 (SOR_0228) folE 215206..215760 (+) 555 WP_000380932.1 GTP cyclohydrolase I FolE -
  SOR_RS01135 (SOR_0229) folK 215919..216740 (+) 822 WP_000372521.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  SOR_RS01140 (SOR_0230) - 216733..218016 (+) 1284 WP_001125363.1 hypothetical protein -
  SOR_RS01145 (SOR_0231) - 218068..218385 (-) 318 WP_000886045.1 DUF960 domain-containing protein -
  SOR_RS01150 (SOR_0232) ccpA 218590..219600 (+) 1011 WP_001090635.1 catabolite control protein A Regulator
  SOR_RS01155 (SOR_0233) - 219654..220616 (-) 963 WP_001124803.1 asparaginase -
  SOR_RS01160 (SOR_0234) - 220682..222067 (+) 1386 WP_000453125.1 Cof-type HAD-IIB family hydrolase -
  SOR_RS01165 (SOR_0235) - 222104..222556 (-) 453 WP_000079162.1 universal stress protein -
  SOR_RS01170 (SOR_0236) - 222723..223022 (+) 300 WP_000651413.1 hypothetical protein -
  SOR_RS01175 (SOR_0237) - 223167..224381 (+) 1215 WP_000666454.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37214.23 Da        Isoelectric Point: 5.5033

>NTDB_id=40177 SOR_RS01150 WP_001090635.1 218590..219600(+) (ccpA) [Streptococcus oralis Uo5]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=40177 SOR_RS01150 WP_001090635.1 218590..219600(+) (ccpA) [Streptococcus oralis Uo5]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCAATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCGCGTGGTTTGGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCGAATATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGGATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTAGCGAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTGGTCAACACTCTCTTTTCAAAACAAGTTGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTAGAACACCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCCGTGAGCTACCTTCTCAAAGAAAACGAAAAGATTGCTTTTGTTAG
TGGACCACTTGTTGATGATATCAATGGCAAGGTTCGTTTGATTGGTTACAAGGAAGCCTTGAAAAAAGCTGGACATTCTT
ATAGCGAGGGATTGGTCTTTGAATCAAAATACAGCTATGATGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTCCTAAATGGTTTAGCTGACCATGGTGTATCTGTGCC
AGAAGAGTTTGAAATCATTACGACAGATGACTCTCAAATTGCACGATTCACTCGTCCAAACTTGACGACTATTGCCCAAC
CTCTTTATGACTTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCCTACCTCATGGTTTGACAGAACGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0Q241

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.345

100

0.943

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.623

99.405

0.881

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment