Detailed information NTG0401504

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: GKC13_RS02085
• Genome accession: NZ_CP046134
• Coordinates: 387459..388496 (+)
• Length: 345 a.a.
• NCBI ID: WP_179971023.1
• Uniprot ID: A0A3G6K0A6
• Organism: Streptococcus thermophilus strain MAG_rmk202_sterm
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 382459..393496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKC13_RS10350	-	384371..384496 (+)	126	WP_011681534.1	hypothetical protein	-
GKC13_RS02060 (GKC13_02060)	-	384515..385150 (+)	636	WP_179971026.1	DUF4230 domain-containing protein	-
GKC13_RS09865	-	385220..385390 (+)	171	WP_011226439.1	hypothetical protein	-
GKC13_RS02070 (GKC13_02070)	-	385942..386250 (-)	309	WP_179971427.1	hypothetical protein	-
GKC13_RS02075 (GKC13_02075)	-	386247..386666 (-)	420	WP_002951675.1	HIT family protein	-
GKC13_RS02080 (GKC13_02080)	pptA	386731..387462 (+)	732	WP_002951673.1	ABC transporter ATP-binding protein	Regulator
GKC13_RS02085 (GKC13_02085)	pptB	387459..388496 (+)	1038	WP_179971023.1	ABC transporter permease	Regulator
GKC13_RS02090 (GKC13_02090)	-	388554..389345 (+)	792	WP_002951667.1	phosphotransferase family protein	-
GKC13_RS02095 (GKC13_02095)	trmB	389355..389996 (+)	642	WP_002947526.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
GKC13_RS02105 (GKC13_02105)	-	390232..391413 (-)	1182	WP_207560118.1	NAD(P)/FAD-dependent oxidoreductase	-
GKC13_RS02110 (GKC13_02110)	ilvD	391541..393244 (+)	1704	WP_340139153.1	dihydroxy-acid dehydratase	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 40198.76 Da
• Isoelectric Point: 10.5363

>NTDB_id=401504 GKC13_RS02085 WP_179971023.1 387459..388496(+) (pptB) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MIAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHIKKATGCAFRFWVLIQTLIFILVVPLFLALGLPVWRVVLVAVAMAILKYFIFQKKAQPFYKQS
GLNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGYLDGILKRTKKDKKYTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVSNLKRLINQIVLVMTLIQALCLFDLKF
SLILVGVMLVLSLVYLPAKLKKMID

Nucleotide

• Length: 1038 bp

>NTDB_id=401504 GKC13_RS02085 WP_179971023.1 387459..388496(+) (pptB) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGA
CCACTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGA
ATCCATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTCTTACTGCCTTTTTGGGGCAATATTGCCACCTATTTAGAG
CCTGCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGTGTGCTTTTAG
ATTTTGGGTGCTCATCCAGACCTTGATTTTTATCTTGGTCGTCCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGAGAG
TTGTCCTTGTAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCT
GGGTTGAATTGGACTGATGCTATTGCAGCGGAGAATAAACGACAACAATCAATCTTGAAGTTTTTCTCACTTTTTACCAA
TGTTAAGGGAATTACATCGAGTGTTAAACGCCGTGGCTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAAT
ATACGTGGTACAACCTGTACCTGAGAGCCTTCTTACGTTCAGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCTTTA
ACACTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTT
CCAGCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGGCCAACCTTATGCCAATTGGAAAAGACATGCAGGTGA
GCAATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTT
AGCCTGATTTTGGTTGGAGTTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

• Bacterial ABC transporter protein EcsB (EcsB) (4-160)

• Bacterial ABC transporter protein EcsB (EcsB) (158-330)

3D structure

• AlphaFold DB: A0A3G6K0A6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus thermophilus LMD-9	98.256	99.71	0.98
pptB	Streptococcus salivarius strain HSISS4	92.733	99.71	0.925