Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   GFU50_RS11850 Genome accession   NZ_CP046123
Coordinates   2458971..2460239 (-) Length   422 a.a.
NCBI ID   WP_010749319.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain EC291     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2453971..2465239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFU50_RS11845 (GFU50_11845) - 2457193..2458902 (-) 1710 WP_010749320.1 proline--tRNA ligase -
  GFU50_RS11850 (GFU50_11850) eeP 2458971..2460239 (-) 1269 WP_010749319.1 RIP metalloprotease RseP Regulator
  GFU50_RS11855 (GFU50_11855) - 2460389..2461195 (-) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  GFU50_RS11860 (GFU50_11860) - 2461192..2461992 (-) 801 WP_010749317.1 isoprenyl transferase -
  GFU50_RS11865 (GFU50_11865) frr 2462184..2462741 (-) 558 WP_005229434.1 ribosome recycling factor -
  GFU50_RS11870 (GFU50_11870) pyrH 2462743..2463465 (-) 723 WP_005229433.1 UMP kinase -
  GFU50_RS11875 (GFU50_11875) tsf 2463613..2464494 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45431.71 Da        Isoelectric Point: 4.4845

>NTDB_id=401276 GFU50_RS11850 WP_010749319.1 2458971..2460239(-) (eeP) [Enterococcus casseliflavus strain EC291]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAMTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGVRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=401276 GFU50_RS11850 WP_010749319.1 2458971..2460239(-) (eeP) [Enterococcus casseliflavus strain EC291]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTTATCAATGGCAATGAACAAG
AAGCGATGACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCAGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGCGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCCATCAACTTGGGGATCTTTAATTTATTGCCGATTCCTGGATTGGATGGCG
GGAAGCTGGTTTTAAATATTTTAGAAGGTGTGCGAGGTAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACCCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519

Multiple sequence alignment