Detailed information NTG0040088

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SPNINV200_RS09650
• Genome accession: NC_017593
• Coordinates: 1824625..1825524 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904862.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae INV200
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1819625..1830524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPNINV200_RS09625 (SPNINV200_17950)	rsmA	1819955..1820827 (-)	873	WP_001216879.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
SPNINV200_RS09630 (SPNINV200_17960)	-	1820958..1821266 (-)	309	WP_000333257.1	hypothetical protein	-
SPNINV200_RS09635 (SPNINV200_17970)	-	1821259..1821900 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
SPNINV200_RS09640 (SPNINV200_17980)	-	1821902..1823932 (-)	2031	WP_000825246.1	bacteriocin-associated integral membrane family protein	-
SPNINV200_RS09645 (SPNINV200_17990)	-	1824009..1824305 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
SPNINV200_RS09650 (SPNINV200_18000)	comR	1824625..1825524 (-)	900	WP_000904862.1	helix-turn-helix transcriptional regulator	Regulator
SPNINV200_RS09655 (SPNINV200_18010)	rnmV	1825596..1826156 (-)	561	WP_000660013.1	ribonuclease M5	-
SPNINV200_RS09660 (SPNINV200_18020)	-	1826156..1826929 (-)	774	WP_000575596.1	TatD family hydrolase	-
SPNINV200_RS09665 (SPNINV200_18030)	-	1827234..1828211 (-)	978	Protein_1808	DUF1542 domain-containing protein	-
SPNINV200_RS09670 (SPNINV200_18040)	rpmH	1828417..1828551 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
SPNINV200_RS09675 (SPNINV200_18050)	-	1828696..1829910 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
SPNINV200_RS09680 (SPNINV200_18060)	-	1830066..1830359 (-)	294	WP_000977363.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35409.16 Da
• Isoelectric Point: 4.7732

>NTDB_id=40088 SPNINV200_RS09650 WP_000904862.1 1824625..1825524(-) (comR) [Streptococcus pneumoniae INV200]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=40088 SPNINV200_RS09650 WP_000904862.1 1824625..1825524(-) (comR) [Streptococcus pneumoniae INV200]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365