Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GJQ55_RS12265 Genome accession   NZ_CP046056
Coordinates   2599702..2600085 (-) Length   127 a.a.
NCBI ID   WP_228345249.1    Uniprot ID   A0A9E8JQC4
Organism   Venatoribacter cucullus strain ASxL5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2594702..2605085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJQ55_RS12245 (GJQ55_12175) - 2595725..2596615 (-) 891 WP_228345245.1 CheR family methyltransferase -
  GJQ55_RS12250 (GJQ55_12180) - 2596643..2598694 (-) 2052 WP_228345246.1 methyl-accepting chemotaxis protein -
  GJQ55_RS12255 (GJQ55_12185) - 2598768..2599292 (-) 525 WP_228345247.1 chemotaxis protein CheW -
  GJQ55_RS12260 (GJQ55_12190) pilH 2599294..2599659 (-) 366 WP_228345248.1 twitching motility response regulator PilH -
  GJQ55_RS12265 (GJQ55_12195) pilG 2599702..2600085 (-) 384 WP_228345249.1 twitching motility response regulator PilG Regulator
  GJQ55_RS12270 (GJQ55_12200) gshB 2600312..2601256 (+) 945 WP_228345250.1 glutathione synthase -
  GJQ55_RS12275 (GJQ55_12205) - 2601427..2602302 (+) 876 WP_228345251.1 energy transducer TonB -
  GJQ55_RS12280 (GJQ55_12210) - 2602304..2602861 (+) 558 WP_228345252.1 YqgE/AlgH family protein -
  GJQ55_RS12285 (GJQ55_12215) ruvX 2602861..2603313 (+) 453 WP_228345253.1 Holliday junction resolvase RuvX -
  GJQ55_RS12290 (GJQ55_12220) pyrR 2603310..2603804 (+) 495 WP_228345254.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GJQ55_RS12295 (GJQ55_12225) - 2603818..2604852 (+) 1035 WP_228345255.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14194.48 Da        Isoelectric Point: 8.4748

>NTDB_id=400748 GJQ55_RS12265 WP_228345249.1 2599702..2600085(-) (pilG) [Venatoribacter cucullus strain ASxL5]
MEDNFQNVKVMVIDDSKTIRRTAETLLKKVGCDVITATDGFDALAKIADTHPDIIFVDIMMPRLDGYQTCALIKNNSKFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGSIRQYVKS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=400748 GJQ55_RS12265 WP_228345249.1 2599702..2600085(-) (pilG) [Venatoribacter cucullus strain ASxL5]
ATGGAAGATAACTTTCAGAACGTCAAAGTCATGGTCATCGACGACAGTAAAACCATTCGTCGTACCGCCGAGACGCTGCT
TAAAAAAGTCGGATGTGACGTCATCACTGCCACCGATGGTTTCGACGCATTGGCCAAGATCGCTGATACTCACCCGGACA
TCATCTTTGTCGATATCATGATGCCCCGTCTGGACGGATACCAGACCTGCGCATTGATCAAAAATAATTCCAAGTTCAAG
TCGACACCCGTCATCATGCTGTCCAGTAAGGACGGCCTGTTCGATAAAGCTAAGGGACGCATTGTCGGGTCAGATCAGTA
TCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTGGGATCCATCCGTCAGTATGTAAAATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.165

100

0.772
  vicR Streptococcus mutans UA159

42.373

92.913

0.394
  pilH Synechocystis sp. PCC 6803

41.525

92.913

0.386

Multiple sequence alignment