Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GJD93_RS05005 Genome accession   NZ_CP046045
Coordinates   834892..835275 (+) Length   127 a.a.
NCBI ID   WP_004975524.1    Uniprot ID   A0A1E8E5G7
Organism   Acinetobacter towneri strain 19110F47     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 829892..840275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJD93_RS04995 (GJD93_04990) - 832789..833922 (-) 1134 WP_154320462.1 efflux RND transporter periplasmic adaptor subunit -
  GJD93_RS05000 (GJD93_04995) - 833972..834616 (-) 645 WP_154320463.1 hypothetical protein -
  GJD93_RS05005 (GJD93_05000) pilG 834892..835275 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  GJD93_RS05010 (GJD93_05005) - 835308..835676 (+) 369 WP_004975526.1 PleD family two-component system response regulator -
  GJD93_RS05015 (GJD93_05010) - 835680..836216 (+) 537 WP_004975527.1 chemotaxis protein CheW -
  GJD93_RS05020 (GJD93_05015) - 836263..838338 (+) 2076 WP_154320464.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14243.30 Da        Isoelectric Point: 4.7172

>NTDB_id=400637 GJD93_RS05005 WP_004975524.1 834892..835275(+) (pilG) [Acinetobacter towneri strain 19110F47]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAESNPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=400637 GJD93_RS05005 WP_004975524.1 834892..835275(+) (pilG) [Acinetobacter towneri strain 19110F47]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGCCGTACAGCTGAAACACTTCT
GCAGCGTGAAGGTTGTGAAGTGGTTACCGCAGTTGATGGATTTGAAGCTTTATCCAAAATTGCAGAATCAAATCCAGATA
TCGTATTCGTAGATATTATGATGCCACGCCTAGATGGTTACCAAACGTGTGCCTTAATTAAAAACTCGCAAAACTACCAA
AACATTCCTGTCATTATGCTATCAAGTAAAGATGGTTTATTTGACCAAGCTAAAGGACGTGTAGTAGGTTCTGATGAGTA
TCTGACTAAACCATTTAGTAAAGATGAATTATTAAACGCCATTCGTAACCACGTGACCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E8E5G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment