Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   GJS33_RS07105 Genome accession   NZ_CP046041
Coordinates   1516846..1517847 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus strain AZ-45470     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1511846..1522847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS33_RS07090 (GJS33_07090) - 1512673..1514007 (-) 1335 WP_012677615.1 glycosyltransferase family 4 protein -
  GJS33_RS07095 (GJS33_07095) - 1514009..1515007 (-) 999 WP_154299076.1 glycosyltransferase family 4 protein -
  GJS33_RS07100 (GJS33_07100) - 1515304..1516779 (-) 1476 WP_111692638.1 alpha-amylase -
  GJS33_RS07105 (GJS33_07105) ccpA 1516846..1517847 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  GJS33_RS07110 (GJS33_07110) - 1518021..1519106 (+) 1086 WP_154299077.1 M24 family metallopeptidase -
  GJS33_RS07115 (GJS33_07115) - 1519289..1520872 (-) 1584 WP_042670970.1 ABC transporter ATP-binding protein -
  GJS33_RS09975 - 1520874..1521008 (-) 135 WP_258165016.1 hypothetical protein -
  GJS33_RS07120 (GJS33_07120) - 1521088..1521939 (+) 852 WP_042670972.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=400533 GJS33_RS07105 WP_012516008.1 1516846..1517847(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=400533 GJS33_RS07105 WP_012516008.1 1516846..1517847(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTCGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATCGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGATATTTTAGCTAAAGATCATCAAAGCATTGCCTTTGTTTC
AGGGCCGCTTATTGATGATATCAATGGAAAGGTGCGTTTAGCTGGATACAAGGACGGACTTAAGAAGAACAAGCTTGACT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCTTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAGGCTGGTAAGCGTGTTCC
AGAAGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CGGTCTATGACTTGGGGGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment