Detailed information NTG0400305

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: GJV52_RS02490
• Genome accession: NZ_CP046027
• Coordinates: 474724..475179 (+)
• Length: 151 a.a.
• NCBI ID: WP_095501938.1
• Uniprot ID: -
• Organism: Neisseria brasiliensis strain N.177.16
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 469724..480179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV52_RS02475 (GJV52_02475)	-	470598..472532 (-)	1935	WP_100562465.1	MacB family efflux pump subunit	-
GJV52_RS02480 (GJV52_02480)	-	472621..473796 (-)	1176	WP_095502704.1	efflux RND transporter periplasmic adaptor subunit	-
GJV52_RS02485 (GJV52_02485)	-	474151..474642 (+)	492	WP_095501937.1	type IV pilin protein	-
GJV52_RS02490 (GJV52_02490)	comP	474724..475179 (+)	456	WP_095501938.1	type IV pilin protein	Machinery gene
GJV52_RS02495 (GJV52_02495)	-	475246..476076 (-)	831	WP_095501939.1	HlyC/CorC family transporter	-
GJV52_RS02500 (GJV52_02500)	ybeY	476078..476593 (-)	516	WP_095501940.1	rRNA maturation RNase YbeY	-
GJV52_RS02505 (GJV52_02505)	hemC	476831..477766 (+)	936	WP_095501941.1	hydroxymethylbilane synthase	-
GJV52_RS02510 (GJV52_02510)	catA	477977..478600 (-)	624	WP_064083394.1	type A chloramphenicol O-acetyltransferase	-
GJV52_RS13495	-	478678..478782 (-)	105	Protein_489	conjugal transfer protein	-
GJV52_RS02515 (GJV52_02515)	nth	478813..479451 (+)	639	WP_095501942.1	endonuclease III	-

Sequence

Protein

• Length: 151 a.a.
• Molecular weight: 16871.33 Da
• Isoelectric Point: 8.4772

>NTDB_id=400305 GJV52_RS02490 WP_095501938.1 474724..475179(+) (comP) [Neisseria brasiliensis strain N.177.16]
MRFSQSGFSLIQLLIVIVMLGILAAIAYPAYQIYIKKADLRAAHAALVQNGQFMERFYQQKGSFKQTSTTWPALPITATD
KFCIRPNNNAKGAHDNKFTLKAVAFNSQNEPRVLKIDESLTTFICETSASSCDNDDAFFKGTDKECSIYQP

Nucleotide

• Length: 456 bp

>NTDB_id=400305 GJV52_RS02490 WP_095501938.1 474724..475179(+) (comP) [Neisseria brasiliensis strain N.177.16]
ATGCGATTTTCACAATCCGGCTTTTCCTTGATTCAGCTTTTAATCGTTATTGTCATGTTGGGCATCTTGGCCGCTATCGC
CTATCCTGCTTATCAAATCTATATTAAAAAAGCAGATTTACGCGCTGCACATGCTGCGCTGGTGCAAAACGGGCAATTTA
TGGAACGCTTTTACCAGCAGAAAGGCTCGTTCAAGCAAACTTCAACGACTTGGCCTGCCTTACCTATTACGGCTACCGAC
AAATTCTGCATCCGCCCCAACAACAATGCCAAGGGCGCACACGACAATAAATTTACGCTGAAAGCCGTTGCGTTCAATAG
CCAAAACGAACCACGCGTATTGAAAATCGATGAATCGTTAACGACGTTTATCTGCGAAACCTCCGCCAGTTCATGCGACA
ATGATGATGCGTTTTTTAAAGGCACAGATAAAGAATGCAGCATTTATCAACCTTGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (29-109)

• Prokaryotic N-terminal methylation motif (N_methyl) (4-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria meningitidis 8013	50.694	95.364	0.483
comP	Neisseria gonorrhoeae MS11	50.694	95.364	0.483
comP	Neisseria subflava NJ9703	50.694	95.364	0.483