Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   GJS30_RS15990 Genome accession   NZ_CP045993
Coordinates   3264598..3266901 (-) Length   767 a.a.
NCBI ID   WP_021495364.1    Uniprot ID   -
Organism   Bacillus velezensis strain LABIM22     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3259598..3271901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS30_RS15950 (GJS30_15895) - 3260058..3260489 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  GJS30_RS15955 (GJS30_15900) - 3260489..3260830 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  GJS30_RS15960 (GJS30_15905) - 3260823..3262304 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  GJS30_RS15965 (GJS30_15910) - 3262310..3262786 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  GJS30_RS15970 (GJS30_15915) - 3262786..3263070 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  GJS30_RS15975 (GJS30_15920) mnhG 3263054..3263428 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  GJS30_RS15980 (GJS30_15925) - 3263468..3263851 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  GJS30_RS15985 (GJS30_15930) comA 3263873..3264517 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  GJS30_RS15990 (GJS30_15935) comP 3264598..3266901 (-) 2304 WP_021495364.1 histidine kinase Regulator
  GJS30_RS15995 (GJS30_15945) comQ 3267027..3267986 (-) 960 WP_223204411.1 class 1 isoprenoid biosynthesis enzyme Regulator
  GJS30_RS16000 (GJS30_15950) degQ 3268171..3268311 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  GJS30_RS16005 (GJS30_15955) - 3268777..3269118 (+) 342 WP_007613435.1 hypothetical protein -
  GJS30_RS16010 (GJS30_15960) - 3269125..3270348 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 89005.49 Da        Isoelectric Point: 8.5618

>NTDB_id=400082 GJS30_RS15990 WP_021495364.1 3264598..3266901(-) (comP) [Bacillus velezensis strain LABIM22]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=400082 GJS30_RS15990 WP_021495364.1 3264598..3266901(-) (comP) [Bacillus velezensis strain LABIM22]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAAAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTGCCCCTTGTATTTTATTTTTTGAGTTTAATATGCATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTGCTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGACAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAACGGTCGGATTTGGCCCGTGATCTGCATGATTCAGTGTTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.117

100

0.734

Multiple sequence alignment