Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GJE18_RS11375 Genome accession   NZ_CP045927
Coordinates   2272376..2273041 (-) Length   221 a.a.
NCBI ID   WP_060552041.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain 1379     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2267376..2278041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE18_RS11355 (GJE18_11310) - 2267803..2268429 (+) 627 WP_107368540.1 FMN-dependent NADH-azoreductase -
  GJE18_RS11360 (GJE18_11315) - 2268792..2270615 (-) 1824 WP_165886161.1 ABC transporter permease -
  GJE18_RS11365 (GJE18_11320) - 2270617..2271366 (-) 750 WP_060552040.1 ABC transporter ATP-binding protein -
  GJE18_RS11370 (GJE18_11325) braS 2271456..2272370 (-) 915 WP_171509147.1 sensor histidine kinase Regulator
  GJE18_RS11375 (GJE18_11330) braR 2272376..2273041 (-) 666 WP_060552041.1 response regulator transcription factor Regulator
  GJE18_RS11380 (GJE18_11335) - 2273227..2274084 (-) 858 WP_165805125.1 sensor histidine kinase -
  GJE18_RS11385 (GJE18_11340) - 2274162..2274914 (-) 753 WP_060552043.1 hypothetical protein -
  GJE18_RS11390 (GJE18_11345) - 2274907..2275821 (-) 915 WP_060552044.1 ABC transporter ATP-binding protein -
  GJE18_RS11395 (GJE18_11350) - 2275904..2276572 (-) 669 WP_060552045.1 response regulator transcription factor -
  GJE18_RS11400 (GJE18_11355) - 2276818..2277444 (-) 627 WP_107368537.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25886.99 Da        Isoelectric Point: 6.1435

>NTDB_id=399322 GJE18_RS11375 WP_060552041.1 2272376..2273041(-) (braR) [Staphylococcus agnetis strain 1379]
MKIMIVEDDFTIAESLVKELQKWNHEAVNVQDYYAITEKFHSLQPHLVLLDINLPHLNGFHWCQEIRQTSQVPIMFISSA
SDNMNQMMAMQMGADDFIEKPFNLKLTIMKIQALLRRSYDFKVEQSQLHVKGCDLIVDKAMLTYQDQTLSLTLTELQILQ
QLFINEDHYVSRNTLIEQCWQSENFIDDNTLAVNMSRLRKKLKQIGLVDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=399322 GJE18_RS11375 WP_060552041.1 2272376..2273041(-) (braR) [Staphylococcus agnetis strain 1379]
ATGAAAATTATGATTGTGGAAGATGATTTTACTATTGCTGAAAGCTTAGTAAAAGAACTTCAAAAATGGAATCATGAAGC
GGTCAATGTTCAAGACTATTATGCGATTACTGAAAAATTCCACTCGCTTCAGCCACACCTTGTTCTTTTAGATATCAATC
TACCACATCTTAATGGTTTTCATTGGTGTCAGGAAATCCGTCAAACTTCTCAAGTGCCGATTATGTTTATTAGTTCTGCA
TCTGATAATATGAATCAAATGATGGCGATGCAAATGGGAGCGGATGATTTTATAGAAAAACCGTTTAATTTAAAGTTAAC
CATTATGAAAATCCAAGCGTTGTTAAGACGGTCTTATGATTTTAAAGTGGAACAATCTCAGTTGCATGTAAAAGGATGCG
ATTTGATCGTGGACAAGGCGATGCTCACTTATCAGGATCAAACGCTGTCTTTAACACTTACAGAGCTCCAAATTTTACAA
CAATTATTTATAAATGAAGACCATTATGTCAGTCGTAATACATTAATCGAACAATGTTGGCAATCTGAAAATTTCATCGA
TGACAATACGTTAGCAGTGAATATGTCACGTTTACGGAAAAAATTAAAACAAATTGGGTTAGTGGATTTCATACAAACGA
AAAAGAATGTTGGATACAAAGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

69.683

100

0.697

Multiple sequence alignment