Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   GJE18_RS11370 Genome accession   NZ_CP045927
Coordinates   2271456..2272370 (-) Length   304 a.a.
NCBI ID   WP_171509147.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain 1379     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2266456..2277370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE18_RS11350 (GJE18_11305) spn 2267251..2267571 (+) 321 WP_060552037.1 SPIN family peroxidase inhibitor -
  GJE18_RS11355 (GJE18_11310) - 2267803..2268429 (+) 627 WP_107368540.1 FMN-dependent NADH-azoreductase -
  GJE18_RS11360 (GJE18_11315) - 2268792..2270615 (-) 1824 WP_165886161.1 ABC transporter permease -
  GJE18_RS11365 (GJE18_11320) - 2270617..2271366 (-) 750 WP_060552040.1 ABC transporter ATP-binding protein -
  GJE18_RS11370 (GJE18_11325) braS 2271456..2272370 (-) 915 WP_171509147.1 sensor histidine kinase Regulator
  GJE18_RS11375 (GJE18_11330) braR 2272376..2273041 (-) 666 WP_060552041.1 response regulator transcription factor Regulator
  GJE18_RS11380 (GJE18_11335) - 2273227..2274084 (-) 858 WP_165805125.1 sensor histidine kinase -
  GJE18_RS11385 (GJE18_11340) - 2274162..2274914 (-) 753 WP_060552043.1 hypothetical protein -
  GJE18_RS11390 (GJE18_11345) - 2274907..2275821 (-) 915 WP_060552044.1 ABC transporter ATP-binding protein -
  GJE18_RS11395 (GJE18_11350) - 2275904..2276572 (-) 669 WP_060552045.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 304 a.a.        Molecular weight: 35693.55 Da        Isoelectric Point: 7.6807

>NTDB_id=399321 GJE18_RS11370 WP_171509147.1 2271456..2272370(-) (braS) [Staphylococcus agnetis strain 1379]
MRHLRFYTHIFSDICIYVLMLMLFLFISFIYGLEVEAYILILSVSLFVFSLYIAVKWVYFKKQETLKQINTRLEDELQDV
KTKHRHYQRDLEHYFLTWVHQIKTPITASKLLLERNEAGMVNRVRQEITEIENYTNLALNYLKLLSHETDMVVQKVALED
IVKPLIQRYALHFIEHRTRIHTEHLNCEVTTDAQWIKIMIEQILNNALKYAKGGDIWIVFDAQQHTLTIKDNGIGINKVD
LPKIFEKGYSGTNGRLNDKSSGIGLFIVKEISEKLHHPIAVQSEPGIYTEFTIQFPKPSHLTNM

Nucleotide


Download         Length: 915 bp        

>NTDB_id=399321 GJE18_RS11370 WP_171509147.1 2271456..2272370(-) (braS) [Staphylococcus agnetis strain 1379]
GTGAGGCACTTGCGTTTTTATACTCATATTTTTAGTGATATATGCATATACGTGCTCATGTTAATGTTATTTTTATTTAT
ATCATTCATCTATGGTCTTGAAGTAGAAGCATATATATTGATTTTAAGCGTGTCGCTATTTGTTTTCAGCTTGTATATCG
CTGTGAAATGGGTTTATTTTAAAAAGCAAGAAACATTAAAACAAATCAATACGCGCCTAGAAGATGAATTGCAAGACGTT
AAAACAAAACATCGTCACTATCAACGAGATTTAGAGCATTATTTTTTAACGTGGGTGCATCAAATTAAAACGCCAATTAC
TGCCTCTAAACTTTTATTAGAACGTAATGAAGCGGGGATGGTGAACCGCGTACGTCAAGAAATCACAGAAATTGAAAATT
ATACTAATTTGGCACTGAATTACTTAAAATTGTTAAGCCATGAAACCGACATGGTGGTCCAAAAAGTGGCGCTTGAAGAT
ATCGTCAAACCATTAATCCAACGATATGCATTACATTTTATTGAACATCGTACACGCATTCATACAGAGCACCTTAATTG
TGAGGTGACGACAGACGCCCAATGGATCAAGATTATGATTGAACAAATTTTAAATAATGCACTCAAATACGCTAAAGGTG
GCGATATTTGGATTGTATTCGATGCGCAACAACACACACTCACAATTAAAGATAACGGTATCGGTATCAATAAGGTCGAT
TTGCCAAAGATATTTGAAAAAGGGTATTCCGGGACGAATGGTCGTTTGAATGACAAATCTAGTGGAATAGGATTGTTTAT
TGTGAAAGAAATTTCAGAGAAACTGCATCATCCTATAGCTGTTCAATCAGAACCTGGCATATATACAGAATTTACGATTC
AGTTTCCGAAACCATCTCATCTTACAAATATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(192-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

50.171

96.382

0.484

Multiple sequence alignment