Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | APZ19_RS01710 | Genome accession | NZ_CP045859 |
| Coordinates | 349880..350473 (+) | Length | 197 a.a. |
| NCBI ID | WP_009705519.1 | Uniprot ID | A0AAP9K910 |
| Organism | Vibrio owensii strain SH14 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344880..355473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APZ19_RS01695 (APZ19_01695) | - | 345560..348130 (-) | 2571 | WP_054824718.1 | penicillin-binding protein 1A | - |
| APZ19_RS01700 (APZ19_01700) | pilM | 348309..349325 (+) | 1017 | WP_054824717.1 | type IV pilus assembly protein PilM | Machinery gene |
| APZ19_RS01705 (APZ19_01705) | pilN | 349309..349887 (+) | 579 | WP_054824716.1 | PilN domain-containing protein | Machinery gene |
| APZ19_RS01710 (APZ19_01710) | pilO | 349880..350473 (+) | 594 | WP_009705519.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| APZ19_RS01715 (APZ19_01715) | pilP | 350463..350978 (+) | 516 | WP_005438430.1 | pilus assembly protein PilP | Machinery gene |
| APZ19_RS01720 (APZ19_01720) | pilQ | 351013..352761 (+) | 1749 | WP_045412013.1 | type IV pilus secretin PilQ | Machinery gene |
| APZ19_RS01725 (APZ19_01725) | aroK | 352951..353469 (+) | 519 | WP_005438434.1 | shikimate kinase AroK | - |
| APZ19_RS01730 (APZ19_01730) | aroB | 353501..354601 (+) | 1101 | WP_054824715.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23042.65 Da Isoelectric Point: 5.1105
>NTDB_id=398738 APZ19_RS01710 WP_009705519.1 349880..350473(+) (pilO) [Vibrio owensii strain SH14]
MVNWQDLEMDEIAEWPLVPQLVVLLMLVLLIQGFGYWFYLKPEQARLDNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEEKKDAK
MVNWQDLEMDEIAEWPLVPQLVVLLMLVLLIQGFGYWFYLKPEQARLDNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEEKKDAK
Nucleotide
Download Length: 594 bp
>NTDB_id=398738 APZ19_RS01710 WP_009705519.1 349880..350473(+) (pilO) [Vibrio owensii strain SH14]
ATGGTTAATTGGCAAGACCTTGAAATGGATGAAATCGCTGAATGGCCATTGGTGCCGCAGTTAGTGGTTCTCTTAATGCT
CGTGTTGTTGATTCAAGGCTTCGGTTACTGGTTCTATTTAAAGCCAGAGCAAGCGCGTTTGGACAATTTGATTCAAGAAG
AGCAAACCTTAAAAGTTGCGCTGAGAATCAAGGCCAATAAAGTGGCGGCTTTGCCTCAACTGCAATCACAACTCGATGAG
CTCACCACTCGCTACGAACTGCTACTGCAACAGCTACCTGCGCAAAAAGAGCTGGCCACCATGCTGGCTTCGGTGAATGA
ACTGGGCATCGATAACAAACTGACATTTACCCGCATTGACTGGGGGGAGAAACAGTCAGAGCACTTTCTTTATCGTCTGC
CGCTGAATATTGAACTCACTGGAGACTTTCATGATATCGGCCGTTTCTCTCAAGCCATCGCCACATTGCCTCGCATCATC
ACGTTTAAAGACGTGACTTGGCAACGAGTGAGTCAAGAAAGTGAAACTTTGCACTTCCGTGTAAAAGCGAATACCTACCA
GTTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
ATGGTTAATTGGCAAGACCTTGAAATGGATGAAATCGCTGAATGGCCATTGGTGCCGCAGTTAGTGGTTCTCTTAATGCT
CGTGTTGTTGATTCAAGGCTTCGGTTACTGGTTCTATTTAAAGCCAGAGCAAGCGCGTTTGGACAATTTGATTCAAGAAG
AGCAAACCTTAAAAGTTGCGCTGAGAATCAAGGCCAATAAAGTGGCGGCTTTGCCTCAACTGCAATCACAACTCGATGAG
CTCACCACTCGCTACGAACTGCTACTGCAACAGCTACCTGCGCAAAAAGAGCTGGCCACCATGCTGGCTTCGGTGAATGA
ACTGGGCATCGATAACAAACTGACATTTACCCGCATTGACTGGGGGGAGAAACAGTCAGAGCACTTTCTTTATCGTCTGC
CGCTGAATATTGAACTCACTGGAGACTTTCATGATATCGGCCGTTTCTCTCAAGCCATCGCCACATTGCCTCGCATCATC
ACGTTTAAAGACGTGACTTGGCAACGAGTGAGTCAAGAAAGTGAAACTTTGCACTTCCGTGTAAAAGCGAATACCTACCA
GTTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
93.158 |
96.447 |
0.898 |
| pilO | Vibrio cholerae strain A1552 |
72.251 |
96.954 |
0.701 |