Detailed information NTG0398730

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GII23_RS21510
• Genome accession: NZ_CP045858
• Coordinates: 4574215..4575279 (-)
• Length: 354 a.a.
• NCBI ID: WP_061337879.1
• Uniprot ID: A0A9X7V817
• Organism: Stutzerimonas balearica strain EC28
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4569215..4580279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII23_RS21485 (GII23_21420)	aroK	4569803..4570348 (-)	546	WP_061339736.1	shikimate kinase AroK	-
GII23_RS21490 (GII23_21425)	pilQ	4570353..4572443 (-)	2091	WP_061339735.1	type IV pilus secretin PilQ	Machinery gene
GII23_RS21495 (GII23_21430)	-	4572499..4573026 (-)	528	WP_165564081.1	pilus assembly protein PilP	-
GII23_RS21500 (GII23_21435)	pilO	4573023..4573646 (-)	624	WP_043218303.1	type 4a pilus biogenesis protein PilO	-
GII23_RS21505 (GII23_21440)	-	4573643..4574215 (-)	573	WP_043218300.1	PilN domain-containing protein	-
GII23_RS21510 (GII23_21445)	pilM	4574215..4575279 (-)	1065	WP_061337879.1	pilus assembly protein PilM	Machinery gene
GII23_RS21515 (GII23_21450)	-	4575461..4577872 (+)	2412	WP_165564212.1	penicillin-binding protein 1A	-
GII23_RS21520 (GII23_21455)	-	4578014..4579279 (-)	1266	WP_061339733.1	malic enzyme-like NAD(P)-binding protein	-
GII23_RS21525 (GII23_21460)	-	4579439..4580155 (-)	717	WP_369804574.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37908.36 Da
• Isoelectric Point: 4.5789

>NTDB_id=398730 GII23_RS21510 WP_061337879.1 4574215..4575279(-) (pilM) [Stutzerimonas balearica strain EC28]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVARAKTGCKQAAV
AVSGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARAPGRVDVLLAACRKENVEIREAALAL
AGLSAKVVDVEAYALERSYDLLAPMLAQGHADLTVAIVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYETEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPDLDRLIQQKVGTQTMVANP
FADMSLSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=398730 GII23_RS21510 WP_061337879.1 4574215..4575279(-) (pilM) [Stutzerimonas balearica strain EC28]
GTGCTAGGGCTCTTCACTAAGAAAGCGAATACGCTACTTGGGATCGACATTAGTTCGACCTCGGTCAAGCTCCTGGAATT
AAGCCGCTCAGGCAATCGCTATCGGGTCGAGGCGTACGCCGTTGAGCCTTTGCCGCCCAACGCAGTGGTCGAGAAGAACA
TTGCCGAGCTGGAGGGGGTCGGGCAGGCCCTGCAGCGTGTTGTGGCGCGCGCCAAGACCGGTTGCAAGCAAGCCGCTGTC
GCTGTCTCCGGCTCGGCGGTCATTACCAAGACCATCGAAATGGACGGCGGCCTGAGCGATGACGAGCTGGAGAATCAGCT
CAAGATCGAGGCGGACCAGTACATTCCTTACCCGCTCGAAGAAGTTGCCATCGATTTCGAGGTTCAGGGCCCTGCGGCGC
GCGCTCCTGGGCGCGTGGACGTGCTGCTTGCGGCCTGTCGCAAGGAGAACGTGGAGATCCGCGAGGCCGCTCTAGCGCTC
GCCGGTCTGAGCGCAAAGGTGGTCGATGTCGAGGCGTATGCGCTAGAGCGGTCCTACGATCTGCTCGCGCCCATGCTTGC
ACAGGGGCACGCCGATCTCACCGTCGCCATCGTCGATATTGGCGCCACCATGACCACGCTCAGTGTGCTGCACAACGGCC
GTACCATTTATACCCGGGAGCAGCTGTTTGGCGGTCGCCAGCTCACCGAGGAAATTCAGCGTCGCTACGGGCTTTCGGTG
GAGGAGGCAGGGCTGGCGAAGAAACAGGGTGGCTTGCCGGACGACTACGAAACCGAAGTGTTGCAGCCGTTCAAGGAGGC
GGTCGTTCAGCAGGTGTCGCGCTCACTGCAGTTCTTTTTCGCAGCCGGTCAGTTCCATGACGTGGATTGCATTCTGCTGG
CAGGTGGCACGGCTTCGATACCGGATCTCGACCGGCTCATCCAGCAGAAGGTGGGCACGCAGACCATGGTTGCCAATCCG
TTCGCCGACATGTCGCTGAGCAGCAAGGTCAACGCCGGGGCGCTGGCGAGCGATGCGCCCGCGCTGATGATTGCCTGTGG
CTTGGCCCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.062	100	0.571
comM	Acinetobacter nosocomialis M2	57.062	100	0.571
comM	Acinetobacter baylyi ADP1	53.955	100	0.54
pilM	Legionella pneumophila strain ERS1305867	48.305	100	0.483