Detailed information NTG0398100

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII80_RS20030
• Genome accession: NZ_CP045821
• Coordinates: 3821673..3822818 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB8_B7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3816673..3827818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII80_RS20005 (GII80_20005)	albF	3816689..3817969 (+)	1281	WP_003242974.1	pitrilysin family protein	-
GII80_RS20010 (GII80_20010)	albG	3817966..3818667 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII80_RS20015 (GII80_20015)	ywhL	3818673..3820049 (-)	1377	WP_003244415.1	YncE family protein	-
GII80_RS20020 (GII80_20020)	ywhK	3820088..3821443 (-)	1356	WP_003227552.1	YncE family protein	-
GII80_RS22735 (GII80_20025)	-	3821440..3821670 (-)	231	WP_009968328.1	hypothetical protein	-
GII80_RS20030 (GII80_20030)	rapF	3821673..3822818 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
GII80_RS20035 (GII80_20035)	phrF	3822802..3822921 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII80_RS20040 (GII80_20040)	ywhH	3823020..3823493 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
GII80_RS20045 (GII80_20045)	speB	3823525..3824397 (-)	873	WP_003227545.1	agmatinase	-
GII80_RS20050 (GII80_20050)	speE	3824458..3825288 (-)	831	WP_003227543.1	spermidine synthase	-
GII80_RS20055 (GII80_20055)	pbpG	3825490..3827565 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=398100 GII80_RS20030 WP_003227549.1 3821673..3822818(+) (rapF) [Bacillus subtilis strain MB8_B7]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=398100 GII80_RS20030 WP_003227549.1 3821673..3822818(+) (rapF) [Bacillus subtilis strain MB8_B7]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572