Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   GII85_RS18985 Genome accession   NZ_CP045817
Coordinates   3710193..3710312 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain P5_B1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3705193..3715312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII85_RS18960 (GII85_18960) albG 3705357..3706058 (+) 702 WP_041850410.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  GII85_RS18965 (GII85_18965) ywhL 3706064..3707440 (-) 1377 WP_041850409.1 YncE family protein -
  GII85_RS18970 (GII85_18970) ywhK 3707479..3708834 (-) 1356 WP_041850408.1 YncE family protein -
  GII85_RS21215 (GII85_18975) - 3708831..3709061 (-) 231 Protein_3696 hypothetical protein -
  GII85_RS18980 (GII85_18980) rapF 3709064..3710209 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  GII85_RS18985 (GII85_18985) phrF 3710193..3710312 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  GII85_RS18990 (GII85_18990) ywhH 3710410..3710883 (+) 474 Protein_3699 YbaK/EbsC family protein -
  GII85_RS18995 (GII85_18995) speB 3710914..3711786 (-) 873 WP_003227545.1 agmatinase -
  GII85_RS19000 (GII85_19000) speE 3711847..3712677 (-) 831 WP_003227543.1 spermidine synthase -
  GII85_RS19005 (GII85_19005) pbpG 3712879..3714954 (+) 2076 WP_041850407.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=397776 GII85_RS18985 WP_009968329.1 3710193..3710312(+) (phrF) [Bacillus subtilis strain P5_B1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=397776 GII85_RS18985 WP_009968329.1 3710193..3710312(+) (phrF) [Bacillus subtilis strain P5_B1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment