Detailed information NTG0397775

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII85_RS18980
• Genome accession: NZ_CP045817
• Coordinates: 3709064..3710209 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain P5_B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3704064..3715209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII85_RS18955 (GII85_18955)	albF	3704080..3705360 (+)	1281	WP_041850411.1	pitrilysin family protein	-
GII85_RS18960 (GII85_18960)	albG	3705357..3706058 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII85_RS18965 (GII85_18965)	ywhL	3706064..3707440 (-)	1377	WP_041850409.1	YncE family protein	-
GII85_RS18970 (GII85_18970)	ywhK	3707479..3708834 (-)	1356	WP_041850408.1	YncE family protein	-
GII85_RS21215 (GII85_18975)	-	3708831..3709061 (-)	231	Protein_3696	hypothetical protein	-
GII85_RS18980 (GII85_18980)	rapF	3709064..3710209 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
GII85_RS18985 (GII85_18985)	phrF	3710193..3710312 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII85_RS18990 (GII85_18990)	ywhH	3710410..3710883 (+)	474	Protein_3699	YbaK/EbsC family protein	-
GII85_RS18995 (GII85_18995)	speB	3710914..3711786 (-)	873	WP_003227545.1	agmatinase	-
GII85_RS19000 (GII85_19000)	speE	3711847..3712677 (-)	831	WP_003227543.1	spermidine synthase	-
GII85_RS19005 (GII85_19005)	pbpG	3712879..3714954 (+)	2076	WP_041850407.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=397775 GII85_RS18980 WP_021480843.1 3709064..3710209(+) (rapF) [Bacillus subtilis strain P5_B1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=397775 GII85_RS18980 WP_021480843.1 3709064..3710209(+) (rapF) [Bacillus subtilis strain P5_B1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572