Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | HR084_RS03785 | Genome accession | NZ_CP054177 |
| Coordinates | 735723..736853 (+) | Length | 376 a.a. |
| NCBI ID | WP_173613970.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain JCL16 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 730723..741853
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR084_RS03765 (HR084_03765) | - | 730951..732819 (-) | 1869 | WP_173613967.1 | T7SS effector LXG polymorphic toxin | - |
| HR084_RS03770 (HR084_03770) | - | 732986..733324 (+) | 339 | WP_021481280.1 | hypothetical protein | - |
| HR084_RS03775 (HR084_03775) | - | 733337..734257 (+) | 921 | WP_173613968.1 | DUF5655 domain-containing protein | - |
| HR084_RS03780 (HR084_03780) | - | 734413..735573 (+) | 1161 | WP_173613969.1 | lysozyme inhibitor LprI family protein | - |
| HR084_RS03785 (HR084_03785) | rapC | 735723..736853 (+) | 1131 | WP_173613970.1 | response regulator aspartate phosphatase RapH | Regulator |
| HR084_RS03790 (HR084_03790) | phrH | 736843..737016 (+) | 174 | WP_032722986.1 | phosphatase RapH inhibitor PhrH | - |
| HR084_RS03795 (HR084_03795) | yeeI | 737176..737895 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HR084_RS03800 (HR084_03800) | yeeK | 738029..738475 (+) | 447 | WP_015715466.1 | spore coat protein YeeK | - |
| HR084_RS03805 (HR084_03805) | yezE | 738590..739174 (+) | 585 | WP_024571799.1 | TetR/AcrR family transcriptional regulator | - |
| HR084_RS03810 (HR084_03810) | yesE | 739253..739696 (+) | 444 | WP_116316353.1 | nuclear transport factor 2 family protein | - |
| HR084_RS03815 (HR084_03815) | yesF | 739693..740558 (+) | 866 | Protein_705 | NAD-dependent epimerase/dehydratase family protein | - |
| HR084_RS03820 (HR084_03820) | cotJA | 740688..740936 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| HR084_RS03825 (HR084_03825) | cotJB | 740920..741183 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| HR084_RS03830 (HR084_03830) | cotJC | 741198..741767 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44038.29 Da Isoelectric Point: 5.7372
>NTDB_id=397775 HR084_RS03785 WP_173613970.1 735723..736853(+) (rapC) [Bacillus subtilis strain JCL16]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTFGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKTGQTQRAFQFIEEGLDHITARSHKFYRELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTFGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKTGQTQRAFQFIEEGLDHITARSHKFYRELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=397775 HR084_RS03785 WP_173613970.1 735723..736853(+) (rapC) [Bacillus subtilis strain JCL16]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTTGAGCAGGACATTCAGAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAAACATTCGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTTGAAGCCATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGATATTGAGAAAGCCGAATTCCATTTTAAAGTGGCAGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATAAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAGACAGGCCAAACACAGCGGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAGAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTACTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTTGAGCAGGACATTCAGAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAAACATTCGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTTGAAGCCATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGATATTGAGAAAGCCGAATTCCATTTTAAAGTGGCAGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATAAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAGACAGGCCAAACACAGCGGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAGAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTACTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.691 |
100 |
0.407 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.257 |
100 |
0.394 |