Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   GII86_RS19985 Genome accession   NZ_CP045816
Coordinates   3744335..3744454 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain P5_B2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3739335..3749454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS19960 (GII86_19960) albG 3739499..3740200 (+) 702 WP_046160959.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  GII86_RS19965 (GII86_19965) ywhL 3740206..3741582 (-) 1377 WP_041351296.1 YncE family protein -
  GII86_RS19970 (GII86_19970) ywhK 3741621..3742976 (-) 1356 WP_015250986.1 YncE family protein -
  GII86_RS22415 (GII86_19975) - 3742973..3743203 (-) 231 Protein_3921 hypothetical protein -
  GII86_RS19980 (GII86_19980) rapF 3743206..3744351 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  GII86_RS19985 (GII86_19985) phrF 3744335..3744454 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  GII86_RS19990 (GII86_19990) ywhH 3744552..3745025 (+) 474 Protein_3924 YbaK/EbsC family protein -
  GII86_RS19995 (GII86_19995) speB 3745056..3745928 (-) 873 WP_003227545.1 agmatinase -
  GII86_RS20000 (GII86_20000) speE 3745989..3746819 (-) 831 WP_003227543.1 spermidine synthase -
  GII86_RS20005 (GII86_20005) pbpG 3747021..3749096 (+) 2076 WP_015384942.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=397696 GII86_RS19985 WP_009968329.1 3744335..3744454(+) (phrF) [Bacillus subtilis strain P5_B2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=397696 GII86_RS19985 WP_009968329.1 3744335..3744454(+) (phrF) [Bacillus subtilis strain P5_B2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment