Detailed information NTG0397695

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII86_RS19980
• Genome accession: NZ_CP045816
• Coordinates: 3743206..3744351 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain P5_B2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3738206..3749351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII86_RS19955 (GII86_19955)	albF	3738222..3739502 (+)	1281	WP_041351297.1	pitrilysin family protein	-
GII86_RS19960 (GII86_19960)	albG	3739499..3740200 (+)	702	WP_046160959.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII86_RS19965 (GII86_19965)	ywhL	3740206..3741582 (-)	1377	WP_041351296.1	YncE family protein	-
GII86_RS19970 (GII86_19970)	ywhK	3741621..3742976 (-)	1356	WP_015250986.1	YncE family protein	-
GII86_RS22415 (GII86_19975)	-	3742973..3743203 (-)	231	Protein_3921	hypothetical protein	-
GII86_RS19980 (GII86_19980)	rapF	3743206..3744351 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
GII86_RS19985 (GII86_19985)	phrF	3744335..3744454 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII86_RS19990 (GII86_19990)	ywhH	3744552..3745025 (+)	474	Protein_3924	YbaK/EbsC family protein	-
GII86_RS19995 (GII86_19995)	speB	3745056..3745928 (-)	873	WP_003227545.1	agmatinase	-
GII86_RS20000 (GII86_20000)	speE	3745989..3746819 (-)	831	WP_003227543.1	spermidine synthase	-
GII86_RS20005 (GII86_20005)	pbpG	3747021..3749096 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=397695 GII86_RS19980 WP_021480843.1 3743206..3744351(+) (rapF) [Bacillus subtilis strain P5_B2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=397695 GII86_RS19980 WP_021480843.1 3743206..3744351(+) (rapF) [Bacillus subtilis strain P5_B2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572