Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BSN5_RS06815 Genome accession   NC_014976
Coordinates   1260894..1263206 (-) Length   770 a.a.
NCBI ID   WP_015714625.1    Uniprot ID   -
Organism   Bacillus subtilis BSn5     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1255894..1268206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS06775 (BSn5_06700) mrpB 1256361..1256792 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  BSN5_RS06780 (BSn5_06705) mrpC 1256792..1257133 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  BSN5_RS06785 (BSn5_06710) mrpD 1257126..1258607 (+) 1482 WP_015714622.1 Na+/H+ antiporter subunit D -
  BSN5_RS06790 (BSn5_06715) mrpE 1258613..1259089 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BSN5_RS06795 (BSn5_06720) mrpF 1259089..1259373 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSN5_RS06800 (BSn5_06725) mnhG 1259357..1259731 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  BSN5_RS06805 (BSn5_06730) yuxO 1259770..1260150 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  BSN5_RS06810 (BSn5_06735) comA 1260169..1260813 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BSN5_RS06815 (BSn5_06740) comP 1260894..1263206 (-) 2313 WP_015714625.1 histidine kinase Regulator
  BSN5_RS06820 (BSn5_06745) comX 1263222..1263443 (-) 222 WP_014114983.1 competence pheromone ComX -
  BSN5_RS06825 (BSn5_06750) - 1263440..1264309 (-) 870 WP_015714626.1 polyprenyl synthetase family protein -
  BSN5_RS06830 (BSn5_06755) degQ 1264494..1264634 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSN5_RS21935 - 1264856..1264981 (+) 126 WP_141770195.1 hypothetical protein -
  BSN5_RS06835 (BSn5_06760) - 1265096..1265464 (+) 369 WP_014477834.1 hypothetical protein -
  BSN5_RS06840 (BSn5_06765) pdeH 1265440..1266669 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89278.26 Da        Isoelectric Point: 7.9771

>NTDB_id=39760 BSN5_RS06815 WP_015714625.1 1260894..1263206(-) (comP) [Bacillus subtilis BSn5]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPCSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYTNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=39760 BSN5_RS06815 WP_015714625.1 1260894..1263206(-) (comP) [Bacillus subtilis BSn5]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGGTTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCCTTTACACTTGTTATACCTTGTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATACAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTGG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACAAGGGAGACGTGTCATGAGTTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.307

99.87

0.562


Multiple sequence alignment