Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   GII90_RS16060 Genome accession   NZ_CP045811
Coordinates   3103553..3104452 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain P9_B1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3098553..3109452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII90_RS16025 (GII90_16025) mrpE 3098793..3099269 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  GII90_RS16030 (GII90_16030) mrpF 3099269..3099553 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GII90_RS16035 (GII90_16035) mnhG 3099537..3099911 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  GII90_RS16040 (GII90_16040) yuxO 3099950..3100330 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  GII90_RS16045 (GII90_16045) comA 3100349..3100993 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GII90_RS16050 (GII90_16050) comP 3101074..3103383 (-) 2310 WP_153940278.1 two-component system sensor histidine kinase ComP Regulator
  GII90_RS16055 (GII90_16055) comX 3103398..3103565 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  GII90_RS16060 (GII90_16060) comQ 3103553..3104452 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  GII90_RS16065 (GII90_16065) degQ 3104637..3104777 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GII90_RS16070 (GII90_16070) - 3104999..3105124 (+) 126 WP_003228793.1 hypothetical protein -
  GII90_RS16075 (GII90_16075) - 3105238..3105606 (+) 369 WP_003243784.1 hypothetical protein -
  GII90_RS16080 (GII90_16080) pdeH 3105582..3106811 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  GII90_RS16085 (GII90_16085) pncB 3106948..3108420 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  GII90_RS16090 (GII90_16090) pncA 3108436..3108987 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=397447 GII90_RS16060 WP_003243039.1 3103553..3104452(-) (comQ) [Bacillus subtilis strain P9_B1]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=397447 GII90_RS16060 WP_003243039.1 3103553..3104452(-) (comQ) [Bacillus subtilis strain P9_B1]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment