Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HRD51_RS29675 Genome accession   NZ_CP054019
Coordinates   6720727..6721524 (-) Length   265 a.a.
NCBI ID   WP_073449226.1    Uniprot ID   A0A2N8PC50
Organism   Streptomyces sp. A1-5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6715727..6726524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRD51_RS29660 (HRD51_29300) - 6715959..6716639 (+) 681 WP_235094560.1 GNAT family N-acetyltransferase -
  HRD51_RS29665 (HRD51_29305) - 6716745..6718577 (+) 1833 WP_235094561.1 IucA/IucC family siderophore biosynthesis protein -
  HRD51_RS29670 (HRD51_29310) - 6718639..6720636 (+) 1998 WP_235094562.1 ATP-dependent DNA helicase -
  HRD51_RS29675 (HRD51_29315) dinR/lexA 6720727..6721524 (-) 798 WP_073449226.1 transcriptional repressor LexA Regulator
  HRD51_RS29680 (HRD51_29320) nrdR 6722133..6722660 (+) 528 WP_039632105.1 transcriptional regulator NrdR -
  HRD51_RS29685 (HRD51_29325) - 6722783..6725668 (+) 2886 WP_205366952.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28847.55 Da        Isoelectric Point: 7.0671

>NTDB_id=397238 HRD51_RS29675 WP_073449226.1 6720727..6721524(-) (dinR/lexA) [Streptomyces sp. A1-5]
MTTTADSATITAQSHSQSRFEQPQRAPRTMEDTTSDSEEHKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRASDQPTSAATETAGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=397238 HRD51_RS29675 WP_073449226.1 6720727..6721524(-) (dinR/lexA) [Streptomyces sp. A1-5]
GTGACCACCACCGCAGACAGCGCGACCATCACCGCACAAAGCCACTCCCAGAGCCGATTCGAGCAACCGCAAAGGGCACC
GCGGACGATGGAAGACACCACGTCGGACTCCGAAGAGCACAAGCCGACCCGTTCGCTGCCGGGGCGCCCCCCGGGCATTC
GCGCCGACAGTTCCGGGCTCACCGACCGCCAGCGCCGGGTGATCGAAGTGATCCGGGATTCGGTGCAGCGGCGCGGATAT
CCCCCGTCCATGCGGGAGATCGGCCAGGCCGTCGGGCTCTCCAGCACCTCCTCCGTCGCCCACCAGCTGATGGCCCTGGA
GCGGAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCGCGGGCGTACGAGGTCCGCGCCTCGGACCAGCCGACGAGCGCGG
CGACGGAGACCGCCGGCAAGCCCGCCGCGTCCTACGTGCCGCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCC
GAGGAGTCCGTCGAGGACGTCTTCCCCCTGCCCCGTCAGCTGGTCGGCGACGGCGAGCTGTTCGTGCTGAAGGTCGTGGG
CGACTCCATGATCGAGGCGGCGATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACA
TCGTCGCCGCCATGCTCGACGGCGAGGCGACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTATGGCTGCTGCCGCAC
AATGCCGCGTACCAGCCCATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTGGTGGCGGTGCTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(58-121)

Peptidase S24-like (Peptidase_S24)

(147-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N8PC50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37

Multiple sequence alignment