Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | VVMO6_RS01970 | Genome accession | NC_014965 |
| Coordinates | 404260..404907 (-) | Length | 215 a.a. |
| NCBI ID | WP_011079388.1 | Uniprot ID | Q7MHB7 |
| Organism | Vibrio vulnificus MO6-24/O | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 399260..409907
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VVMO6_RS01960 (VVM_00688) | uvrA | 400237..403059 (-) | 2823 | WP_013571056.1 | excinuclease ABC subunit UvrA | - |
| VVMO6_RS01965 (VVM_00690) | galU | 403202..404074 (-) | 873 | WP_011079387.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| VVMO6_RS01970 (VVM_00692) | qstR | 404260..404907 (-) | 648 | WP_011079388.1 | response regulator transcription factor | Regulator |
| VVMO6_RS01975 (VVM_00693) | ssb | 405207..405746 (+) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| VVMO6_RS01980 (VVM_00695) | csrD | 405899..407896 (+) | 1998 | WP_044023800.1 | RNase E specificity factor CsrD | - |
| VVMO6_RS01985 (VVM_00698) | - | 407909..409369 (+) | 1461 | WP_013571058.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24673.63 Da Isoelectric Point: 9.8565
>NTDB_id=39663 VVMO6_RS01970 WP_011079388.1 404260..404907(-) (qstR) [Vibrio vulnificus MO6-24/O]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=39663 VVMO6_RS01970 WP_011079388.1 404260..404907(-) (qstR) [Vibrio vulnificus MO6-24/O]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCTGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCTGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
47.196 |
99.535 |
0.47 |