Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | GFH30_RS11810 | Genome accession | NZ_CP045650 |
| Coordinates | 2467931..2468575 (-) | Length | 214 a.a. |
| NCBI ID | WP_153372831.1 | Uniprot ID | A0A5Q0P790 |
| Organism | Acinetobacter wanghuae strain dk386 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2462931..2473575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFH30_RS11790 (GFH30_11785) | aroK | 2464001..2464537 (-) | 537 | WP_153372823.1 | shikimate kinase AroK | - |
| GFH30_RS11795 (GFH30_11790) | pilQ | 2464574..2466682 (-) | 2109 | WP_153372825.1 | type IV pilus secretin PilQ | Machinery gene |
| GFH30_RS11800 (GFH30_11795) | pilP | 2466700..2467227 (-) | 528 | WP_153372827.1 | pilus assembly protein PilP | Machinery gene |
| GFH30_RS11805 (GFH30_11800) | comO | 2467227..2467934 (-) | 708 | WP_153389405.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GFH30_RS11810 (GFH30_11805) | comN | 2467931..2468575 (-) | 645 | WP_153372831.1 | PilN domain-containing protein | Machinery gene |
| GFH30_RS11815 (GFH30_11810) | pilM | 2468575..2469633 (-) | 1059 | WP_153372833.1 | pilus assembly protein PilM | Machinery gene |
| GFH30_RS11820 (GFH30_11815) | ponA | 2469800..2472325 (+) | 2526 | WP_153372835.1 | penicillin-binding protein PBP1a | - |
| GFH30_RS11825 (GFH30_11820) | - | 2472377..2473180 (-) | 804 | WP_153372837.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23777.00 Da Isoelectric Point: 5.0874
>NTDB_id=395922 GFH30_RS11810 WP_153372831.1 2467931..2468575(-) (comN) [Acinetobacter wanghuae strain dk386]
MARINLLPWRDELRVKRNNEFIAYSVAALLMGLAAAGGTWFYFDQKLQDQEQANQLIVSTNQNLDVQLKALDGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEVVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAELLRNLEASSWYRNAFMNSFLV
AEEKKEKAASSVIPRVEETYGSFTVTVDLDQVAPVVAADQPTSQPAASTGGATS
MARINLLPWRDELRVKRNNEFIAYSVAALLMGLAAAGGTWFYFDQKLQDQEQANQLIVSTNQNLDVQLKALDGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEVVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAELLRNLEASSWYRNAFMNSFLV
AEEKKEKAASSVIPRVEETYGSFTVTVDLDQVAPVVAADQPTSQPAASTGGATS
Nucleotide
Download Length: 645 bp
>NTDB_id=395922 GFH30_RS11810 WP_153372831.1 2467931..2468575(-) (comN) [Acinetobacter wanghuae strain dk386]
ATGGCAAGAATTAACTTACTTCCTTGGCGTGATGAGCTGAGAGTTAAAAGAAATAATGAATTTATTGCATATTCAGTTGC
AGCATTGCTAATGGGGTTAGCTGCTGCAGGTGGAACATGGTTCTACTTTGATCAAAAATTACAAGATCAAGAACAAGCCA
ATCAGCTGATTGTCAGTACCAATCAAAATTTAGATGTTCAATTGAAAGCTTTAGATGGCTTACAAGAGCAACGTAATGCG
ATTGTTGAACGAATGAAATTGATTCAAGGCTTACAAACCCAGCGCCCAATTGCTGTGCATCTCATTGATGAAGTTGTACG
TGTTACACCAAGCAATATGTACATCACCAAATTTGTCCGTACTGGCGATAAATTTACCATTGAAGGCAAAGCAGAAAGTC
CAAATACTGTGGCGGAATTGCTTCGGAATTTAGAAGCATCCAGTTGGTATCGTAATGCCTTTATGAATTCATTCTTAGTG
GCTGAAGAGAAAAAAGAAAAAGCAGCAAGCTCAGTGATTCCACGTGTAGAAGAGACTTACGGAAGCTTTACAGTAACGGT
TGACTTAGATCAAGTTGCTCCAGTCGTCGCGGCAGATCAGCCAACATCACAACCTGCTGCAAGCACAGGAGGGGCTACAT
CATGA
ATGGCAAGAATTAACTTACTTCCTTGGCGTGATGAGCTGAGAGTTAAAAGAAATAATGAATTTATTGCATATTCAGTTGC
AGCATTGCTAATGGGGTTAGCTGCTGCAGGTGGAACATGGTTCTACTTTGATCAAAAATTACAAGATCAAGAACAAGCCA
ATCAGCTGATTGTCAGTACCAATCAAAATTTAGATGTTCAATTGAAAGCTTTAGATGGCTTACAAGAGCAACGTAATGCG
ATTGTTGAACGAATGAAATTGATTCAAGGCTTACAAACCCAGCGCCCAATTGCTGTGCATCTCATTGATGAAGTTGTACG
TGTTACACCAAGCAATATGTACATCACCAAATTTGTCCGTACTGGCGATAAATTTACCATTGAAGGCAAAGCAGAAAGTC
CAAATACTGTGGCGGAATTGCTTCGGAATTTAGAAGCATCCAGTTGGTATCGTAATGCCTTTATGAATTCATTCTTAGTG
GCTGAAGAGAAAAAAGAAAAAGCAGCAAGCTCAGTGATTCCACGTGTAGAAGAGACTTACGGAAGCTTTACAGTAACGGT
TGACTTAGATCAAGTTGCTCCAGTCGTCGCGGCAGATCAGCCAACATCACAACCTGCTGCAAGCACAGGAGGGGCTACAT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
70.813 |
97.664 |
0.692 |
| pilN | Acinetobacter baumannii D1279779 |
68.396 |
99.065 |
0.678 |