Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GFH30_RS09900 Genome accession   NZ_CP045650
Coordinates   2084281..2084664 (-) Length   127 a.a.
NCBI ID   WP_153372212.1    Uniprot ID   A0A5Q0P5M1
Organism   Acinetobacter wanghuae strain dk386     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2079281..2089664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFH30_RS09885 (GFH30_09880) - 2081229..2083301 (-) 2073 WP_153372207.1 methyl-accepting chemotaxis protein -
  GFH30_RS09890 (GFH30_09885) - 2083346..2083882 (-) 537 WP_153372209.1 chemotaxis protein CheW -
  GFH30_RS09895 (GFH30_09890) - 2083888..2084256 (-) 369 WP_153372211.1 response regulator -
  GFH30_RS09900 (GFH30_09895) pilG 2084281..2084664 (-) 384 WP_153372212.1 twitching motility response regulator PilG Regulator
  GFH30_RS09905 (GFH30_09900) - 2084949..2085587 (+) 639 WP_153373443.1 hypothetical protein -
  GFH30_RS09910 (GFH30_09905) - 2085633..2086766 (+) 1134 WP_153372214.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14230.30 Da        Isoelectric Point: 4.7172

>NTDB_id=395915 GFH30_RS09900 WP_153372212.1 2084281..2084664(-) (pilG) [Acinetobacter wanghuae strain dk386]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAESSPDIIFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=395915 GFH30_RS09900 WP_153372212.1 2084281..2084664(-) (pilG) [Acinetobacter wanghuae strain dk386]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTGATTGATGACTCAAAAACCATTCGTCGTACAGCGGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTCGTCACTGCAGTGGATGGTTTTGAAGCACTATCAAAAATTGCAGAATCGAGTCCAGATA
TTATTTTTGTCGATATTATGATGCCACGTTTAGACGGTTATCAAACGTGTGCACTCATCAAAAATTCTCAAAATTACCAA
AATATCCCTGTGATTATGCTATCGAGTAAAGACGGTTTATTCGATCAAGCGAAAGGTCGTGTTGTGGGTTCGGATGAATA
TTTGACTAAACCATTTAGTAAAGATGAATTGCTTAACGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Q0P5M1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.701

100

0.937
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment