Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GFB63_RS09125 Genome accession   NZ_CP045596
Coordinates   1770298..1771107 (+) Length   269 a.a.
NCBI ID   WP_100262465.1    Uniprot ID   A0A0E2Q3G2
Organism   Streptococcus thermophilus strain TK-P3A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1765298..1776107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFB63_RS09100 (GFB63_09350) - 1765394..1766092 (-) 699 WP_014608374.1 amino acid ABC transporter permease -
  GFB63_RS09105 (GFB63_09355) - 1766110..1766943 (-) 834 WP_002953142.1 transporter substrate-binding domain-containing protein -
  GFB63_RS09110 (GFB63_09360) - 1766955..1767722 (-) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  GFB63_RS09115 (GFB63_09365) vicR 1768249..1768956 (+) 708 WP_011681206.1 response regulator YycF Regulator
  GFB63_RS09120 (GFB63_09370) vicK 1768949..1770289 (+) 1341 WP_084828862.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GFB63_RS09125 (GFB63_09375) vicX 1770298..1771107 (+) 810 WP_100262465.1 MBL fold metallo-hydrolase Regulator
  GFB63_RS09130 (GFB63_09380) - 1771184..1771536 (+) 353 Protein_1762 YbaN family protein -
  GFB63_RS09135 (GFB63_09385) - 1771588..1772802 (-) 1215 WP_084830670.1 aminoacyltransferase -
  GFB63_RS09140 (GFB63_09390) yidA 1772804..1773613 (-) 810 WP_193838276.1 sugar-phosphatase -
  GFB63_RS09145 (GFB63_09395) - 1773821..1774685 (+) 865 Protein_1765 GNAT family N-acetyltransferase -
  GFB63_RS09150 (GFB63_09400) - 1774777..1775163 (+) 387 WP_002953113.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29955.96 Da        Isoelectric Point: 5.5779

>NTDB_id=395499 GFB63_RS09125 WP_100262465.1 1770298..1771107(+) (vicX) [Streptococcus thermophilus strain TK-P3A]
MSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMEN
QLARADFGVGTDFKIFGTSPDTATPLIDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=395499 GFB63_RS09125 WP_100262465.1 1770298..1771107(+) (vicX) [Streptococcus thermophilus strain TK-P3A]
ATCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGAAAA
GAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTGATC
TTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATATGGCATGGAT
ATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACATAT
TTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCTATTGATCCAC
AATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCTGGT
CTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATTTATCTGGGTCATCTTTCCAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAAAAT
CAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACTAAT
AGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2Q3G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment