Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   GE021_RS07315 Genome accession   NZ_CP053792
Coordinates   1469063..1469797 (-) Length   244 a.a.
NCBI ID   WP_003044324.1    Uniprot ID   A0A2D4DPJ6
Organism   Streptococcus canis strain HL_77_1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464063..1474797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS07285 (GE021_007280) - 1465034..1466029 (-) 996 WP_125074439.1 ornithine cyclodeaminase family protein -
  GE021_RS07290 (GE021_007285) - 1466047..1466904 (-) 858 WP_164407408.1 sulfite exporter TauE/SafE family protein -
  GE021_RS07295 (GE021_007290) - 1466933..1467721 (-) 789 WP_003044313.1 TrmB family transcriptional regulator -
  GE021_RS07305 (GE021_007300) - 1468273..1468377 (-) 105 WP_254388079.1 FeoB small GTPase domain-containing protein -
  GE021_RS07310 (GE021_007305) - 1468374..1468852 (-) 479 Protein_1416 ferrous iron transport protein A -
  GE021_RS07315 (GE021_007310) amiE 1469063..1469797 (-) 735 WP_003044324.1 amino acid ABC transporter ATP-binding protein Regulator
  GE021_RS07320 (GE021_007315) - 1469797..1470483 (-) 687 WP_125074441.1 amino acid ABC transporter permease -
  GE021_RS07325 (GE021_007320) tnpA 1470703..1471176 (-) 474 WP_164406611.1 IS200/IS605 family transposase -
  GE021_RS07330 (GE021_007325) - 1471380..1471610 (-) 231 WP_002983885.1 YkuJ family protein -
  GE021_RS07335 (GE021_007330) clpE 1471911..1474202 (+) 2292 WP_003044330.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  GE021_RS07340 (GE021_007335) - 1474329..1474784 (+) 456 WP_164406653.1 NUDIX hydrolase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26746.01 Da        Isoelectric Point: 4.6223

>NTDB_id=394635 GE021_RS07315 WP_003044324.1 1469063..1469797(-) (amiE) [Streptococcus canis strain HL_77_1]
MTEAIISIKDLHKYYDHNEVLKGIDLDIMPGEVVVIIGPSGSGKSTLLRTMNLLEVPTKGQISFEGVDITDKKNDIFSMR
EKMGMVFQQFNLFSNMTVLENITLSPIKTKGMAKAEADKTALNLLDKVGLSEKAKAYPASLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAKEVADRVIFMDGGVIVEEGNPSQLFDQTKEDRTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=394635 GE021_RS07315 WP_003044324.1 1469063..1469797(-) (amiE) [Streptococcus canis strain HL_77_1]
ATGACTGAGGCTATTATTTCAATTAAAGATTTGCACAAGTATTATGATCACAATGAAGTGCTTAAAGGAATTGATTTAGA
CATCATGCCAGGAGAGGTTGTGGTGATTATCGGACCTTCTGGTTCTGGGAAATCAACCTTGCTTCGAACCATGAATCTTT
TGGAAGTACCGACCAAGGGACAGATTAGTTTTGAAGGGGTTGATATTACCGATAAGAAGAATGATATTTTTAGCATGCGC
GAAAAAATGGGAATGGTTTTCCAGCAGTTTAACCTCTTTTCCAATATGACTGTTTTAGAAAATATCACCTTATCGCCAAT
CAAAACCAAGGGAATGGCTAAAGCAGAGGCTGACAAAACAGCCTTGAACTTGTTGGACAAAGTTGGATTATCAGAAAAAG
CCAAGGCTTATCCTGCTAGTCTTTCTGGTGGGCAGCAGCAGCGGATTGCCATTGCGCGTGGACTAGCTATGGATCCAGAT
GTTTTACTCTTTGATGAACCAACTTCAGCCCTTGATCCTGAAATGGTGGGCGAGGTCTTAGCCGTTATGCAGGATTTGGC
TAAATCTGGGATGACCATGGTTATTGTGACTCATGAAATGGGCTTTGCCAAGGAAGTGGCTGACCGAGTCATCTTCATGG
ATGGTGGGGTTATTGTAGAAGAAGGCAACCCTAGCCAACTCTTTGACCAAACCAAAGAAGACCGGACCAAAGATTTTTTG
AGCAAGGTTTTATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DPJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

33.46

100

0.361
  amiE Streptococcus thermophilus LMD-9

33.46

100

0.361
  amiE Streptococcus salivarius strain HSISS4

33.46

100

0.361

Multiple sequence alignment