Detailed information NTG0394454

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FPL20_RS01210
• Genome accession: NZ_CP045478
• Coordinates: 209304..210452 (-)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain JD-014
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 204304..215452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPL20_RS01180 (FPL20_GE00225)	yclO	205021..205968 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
FPL20_RS01185 (FPL20_GE00226)	ceuB	205961..206911 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
FPL20_RS01190 (FPL20_GE00227)	thrD	207296..208660 (+)	1365	WP_003234493.1	aspartate kinase	-
FPL20_RS01195 (FPL20_GE00228)	yczN	208814..208927 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
FPL20_RS01200	yczM	209009..209098 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
FPL20_RS01205 (FPL20_GE00229)	phrC	209198..209320 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
FPL20_RS01210 (FPL20_GE00230)	rapC	209304..210452 (-)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
FPL20_RS01215 (FPL20_GE00231)	yclK	210615..212036 (-)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
FPL20_RS01220 (FPL20_GE00232)	yclJ	212023..212706 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
FPL20_RS01225 (FPL20_GE00233)	yclI	212919..214379 (+)	1461	WP_003234506.1	ABC transporter permease	-
FPL20_RS01230 (FPL20_GE00234)	yclH	214395..215075 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=394454 FPL20_RS01210 WP_003246686.1 209304..210452(-) (rapC) [Bacillus subtilis strain JD-014]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=394454 FPL20_RS01210 WP_003246686.1 209304..210452(-) (rapC) [Bacillus subtilis strain JD-014]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571