Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FPL20_RS01185 Genome accession   NZ_CP045478
Coordinates   205961..206911 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain JD-014     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 200961..211911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS01165 (FPL20_GE00222) cdaE 201829..203247 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  FPL20_RS01170 (FPL20_GE00223) yclQ 203294..204247 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  FPL20_RS01175 (FPL20_GE00224) yclP 204269..205027 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  FPL20_RS01180 (FPL20_GE00225) yclO 205021..205968 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  FPL20_RS01185 (FPL20_GE00226) ceuB 205961..206911 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  FPL20_RS01190 (FPL20_GE00227) thrD 207296..208660 (+) 1365 WP_003234493.1 aspartate kinase -
  FPL20_RS01195 (FPL20_GE00228) yczN 208814..208927 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  FPL20_RS01200 yczM 209009..209098 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  FPL20_RS01205 (FPL20_GE00229) phrC 209198..209320 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  FPL20_RS01210 (FPL20_GE00230) rapC 209304..210452 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=394452 FPL20_RS01185 WP_003234491.1 205961..206911(-) (ceuB) [Bacillus subtilis strain JD-014]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=394452 FPL20_RS01185 WP_003234491.1 205961..206911(-) (ceuB) [Bacillus subtilis strain JD-014]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment