Detailed information NTG0039411

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HIBPF_RS06100
• Genome accession: NC_014920
• Coordinates: 1216158..1217279 (+)
• Length: 373 a.a.
• NCBI ID: WP_006995632.1
• Uniprot ID: -
• Organism: Haemophilus influenzae F3031
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1211158..1222279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIBPF_RS06085 (HIBPF12600)	leuC	1211307..1212716 (-)	1410	WP_005693329.1	3-isopropylmalate dehydratase large subunit	-
HIBPF_RS06090 (HIBPF12610)	leuB	1212892..1213968 (-)	1077	WP_013526132.1	3-isopropylmalate dehydrogenase	-
HIBPF_RS06095 (HIBPF12620)	leuA	1214054..1215601 (-)	1548	WP_013526133.1	2-isopropylmalate synthase	-
HIBPF_RS06100 (HIBPF12640)	dprA	1216158..1217279 (+)	1122	WP_006995632.1	DNA-processing protein DprA	Machinery gene
HIBPF_RS06105 (HIBPF12650)	yaaA	1217332..1218108 (+)	777	WP_013526134.1	peroxide stress protein YaaA	-
HIBPF_RS06110 (HIBPF12660)	-	1218101..1218682 (+)	582	WP_013526135.1	hypothetical protein	-
HIBPF_RS06115 (HIBPF12670)	pfkA	1218778..1219743 (+)	966	WP_013526136.1	6-phosphofructokinase	-
HIBPF_RS06120 (HIBPF12680)	smpB	1219982..1220467 (+)	486	WP_005647965.1	SsrA-binding protein SmpB	-
HIBPF_RS06125 (HIBPF12690)	fis	1220562..1220861 (-)	300	WP_005651583.1	DNA-binding transcriptional regulator Fis	-
HIBPF_RS06130 (HIBPF12700)	dusB	1220855..1221835 (-)	981	WP_013526137.1	tRNA dihydrouridine synthase DusB	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41702.88 Da
• Isoelectric Point: 6.4124

>NTDB_id=39411 HIBPF_RS06100 WP_006995632.1 1216158..1217279(+) (dprA) [Haemophilus influenzae F3031]
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYMPPPDPRRLLEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIMSENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=39411 HIBPF_RS06100 WP_006995632.1 1216158..1217279(+) (dprA) [Haemophilus influenzae F3031]
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTGCCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGATGGGGAGCCATTCAAATTCGCC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCTGCACTTGTGTGGTCACAAAAAGAGGGAAATCATTTAGTGAATTAT
TTTTCCCCTTTTTATCCCTTTTTGTTGAAACAGACCGCAAGTTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGAAGCCGTTATTGCACGACTTACGGAGAATATTGGGCAAAACATTTTGCGA
CAGAACTTTCATTAGCTGGCTTTACGATTACTAGTGGACTTGCATTAGGAATTGATGGACATTGCCATCAAGCTGTGGTC
AATATTCAAGGACAAACTATTGCGGTTTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCGGC
ACAAATCATCGAAAATAATGGCGCATTAGTCTCTGAATTCTTACCAAACCAAGCGCCCATTGCCGCTAATTTCCCACGTC
GTAATCGGATTATTAGCGGGCTTTCAGTCGGCACGCTTGTTGTTGAAGCCACAGAAAAAAGCGGCTCGCTTATTACTGCG
CGATATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCGGGAAACATTCAAAATGAATCAAGTCAAGGTTGTCATCG
CCTAATTAAACAAGGTGCAATGTTAGTAGAAAATGCTAAAGATATTTTGGAAACCCTTTACCAACATTCTATCCATAGCC
AAACTGAAATCGATTTTGACCAGATCGCCGTGCCTAATTACATGCCACCACCTGATCCTCGTCGATTACTAGAAGCACCA
AGCCACCCGAAACTTTATTCGCGTATTGGTTACACGCCTGTGAGCATTGATGATTTAGCGGAAGAATTTAATTTAAGCGT
CGATGTTTTGCTTGTTCAGTTGCTCGATCTTGAGTTGCAAGATCTCATCATGAGTGAAAATGGGTTATATAAACGCGTTT
AG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (316-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	98.928	100	0.989
dprA	Glaesserella parasuis strain SC1401	52.011	93.298	0.485
dprA	Vibrio campbellii strain DS40M4	43.617	100	0.44
dprA	Vibrio cholerae strain A1552	43.288	97.855	0.424
dprA	Legionella pneumophila strain ERS1305867	40.346	93.029	0.375