Detailed information NTG0393822

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FIU87_RS18120
• Genome accession: NZ_CP045403
• Coordinates: 3506027..3507169 (-)
• Length: 380 a.a.
• NCBI ID: WP_152445868.1
• Uniprot ID: A0A5P9HT65
• Organism: Bacillus sp. THAF10
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3501027..3512169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU87_RS18090 (FIU87_18570)	-	3501162..3501572 (-)	411	WP_152445863.1	TIGR03826 family flagellar region protein	-
FIU87_RS18095 (FIU87_18575)	-	3501634..3502305 (-)	672	WP_172971102.1	ComF family protein	-
FIU87_RS18100 (FIU87_18580)	comFA	3502334..3503824 (-)	1491	WP_152445865.1	DEAD/DEAH box helicase	Machinery gene
FIU87_RS18105 (FIU87_18585)	-	3503895..3504737 (-)	843	WP_152446650.1	DegV family protein	-
FIU87_RS18110	-	3504870..3505235 (-)	366	WP_152445866.1	hypothetical protein	-
FIU87_RS18115 (FIU87_18590)	degU	3505282..3506001 (-)	720	WP_152445867.1	response regulator transcription factor	Regulator
FIU87_RS18120 (FIU87_18595)	degS	3506027..3507169 (-)	1143	WP_152445868.1	sensor histidine kinase	Regulator
FIU87_RS18125 (FIU87_18600)	-	3507526..3508158 (+)	633	WP_152445869.1	YigZ family protein	-
FIU87_RS18130 (FIU87_18605)	-	3508183..3509163 (+)	981	WP_152445870.1	LCP family protein	-
FIU87_RS18135 (FIU87_18610)	-	3509300..3510358 (-)	1059	WP_152445871.1	glycosyltransferase family 4 protein	-
FIU87_RS18140 (FIU87_18615)	-	3510593..3511357 (-)	765	WP_152445872.1	glycosyltransferase family A protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 43994.35 Da
• Isoelectric Point: 6.7885

>NTDB_id=393822 FIU87_RS18120 WP_152445868.1 3506027..3507169(-) (degS) [Bacillus sp. THAF10]
MSRKVINSKQLDMIIEQMVNAVEASKDEIFEIGENSRKEFESLGRELNEVKLEVTQQIQKQDMLEGQVRKARNRLSEVSR
QFKNYTEEQIRQAYDHAHELQLELHTTSQKEMQLRNRRNEIERRLLNLEETISKADRLVSQVSVVLNYVTSDLQHVGQMI
ADASEKREFGFKIMEAQEEERRRLSREIHDGPAQMLANVMMRSDLIDRTYRERGPGEALSEIRALKVMVRSALYEVRRII
YDLRPMALDDLGLVPTLKKYISTIEDYHKGYPRIEFFNLGVEHRLSANLEVAVFRLVQESLTNAIKHAQASSIQVKLEIK
PTHITVIVKDDGVGFDTTEKKEKSFGLIGMRERVQLISGELEIQSQPDKGTTVFIKIPLS

Nucleotide

• Length: 1143 bp

>NTDB_id=393822 FIU87_RS18120 WP_152445868.1 3506027..3507169(-) (degS) [Bacillus sp. THAF10]
ATGTCTCGGAAAGTTATAAACTCTAAACAATTAGACATGATTATTGAACAAATGGTAAATGCAGTTGAAGCGAGTAAGGA
CGAAATTTTTGAAATAGGGGAAAATTCCCGTAAAGAATTTGAAAGCCTTGGCAGAGAGCTGAATGAGGTGAAGCTGGAAG
TAACCCAGCAAATCCAAAAGCAGGATATGCTAGAAGGCCAAGTCCGTAAAGCAAGAAACCGTTTGTCGGAAGTAAGCAGG
CAGTTTAAAAACTACACAGAAGAGCAAATACGACAGGCTTACGACCATGCTCATGAATTGCAATTAGAGTTGCACACCAC
TTCACAAAAAGAAATGCAACTTAGAAACCGTAGAAATGAAATTGAACGCCGCCTTTTAAATTTGGAAGAAACGATCTCAA
AGGCAGATCGGTTAGTTAGCCAGGTCTCTGTCGTTTTAAATTATGTGACAAGTGACTTGCAGCATGTGGGACAAATGATT
GCCGATGCCTCTGAAAAACGAGAATTTGGCTTTAAAATCATGGAAGCTCAAGAAGAGGAGCGAAGACGTCTTTCACGAGA
GATTCATGATGGGCCAGCACAAATGCTAGCCAATGTCATGATGCGTTCTGACCTCATCGATCGTACATACCGGGAGAGAG
GACCAGGGGAAGCATTATCGGAAATTCGTGCGCTAAAAGTAATGGTTCGCTCCGCATTATATGAAGTAAGAAGAATCATT
TATGATCTTCGCCCTATGGCACTTGATGACTTAGGTCTTGTGCCAACCTTAAAAAAATATATTTCGACTATCGAGGATTA
TCATAAAGGATATCCTCGGATAGAATTTTTTAACCTTGGAGTGGAGCACCGGCTGTCCGCCAACTTAGAGGTAGCAGTGT
TCCGCCTAGTGCAGGAATCCCTGACAAATGCAATCAAGCATGCGCAGGCGAGCTCCATCCAGGTAAAATTGGAAATTAAG
CCTACCCATATTACTGTCATCGTAAAGGATGATGGCGTAGGATTTGACACGACAGAAAAAAAAGAAAAGTCGTTTGGCTT
GATAGGTATGAGAGAAAGAGTACAGTTAATCAGTGGGGAGCTTGAAATACAATCCCAGCCTGATAAAGGTACCACTGTTT
TCATCAAAATACCGCTAAGCTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (290-379)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A5P9HT65

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	54.286	100	0.55